iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114446

Ensembl Protein ID

Sb06g025690.1

UniProt Accession

C5YE29; C5YE29_SORBI

Genbank Protein ID

EES11277.1; KXG26929.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765; CM000765

Gene Name

SORBI_006G182500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g025690	Sb06g025690.1	Sb06g025690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-29	100.7	328	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v cl++sd ++l+s+s D+t+++W++ + ++
   Q: 328  GHSGDVLCLSWSDnKHLLSASTDKTVRLWEIGSANC 363
           8**********777***************9766655 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEGCQLLVGC RIEMEEEAFF DSREELTASP APSPGPALPW SGSLDSVCQR RERFMRSMGL 60
ECCPAPPQAD AVATVGDVEK EEVVPEFGRL WSQSDENDCS MSSWSTEETG SSVDGVSDDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCCCTCT CCTTTCTCCT CGCCCGCGTC GGCTCGAATC CAATCCCTCC AATAATACGC 60
ACCGCCACCA CCCCATTTGC GCCATGCTGC CGCGGCCGGC GACCACGAGT CAAGAACACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_06g025690

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000337	Aegilops tauschii	71.11	0.00e+00	803.00
IUUC-Aly-006365	Arabidopsis lyrata	44.91	4.00e-131	461.00
IUUC-Ath-006851	Arabidopsis thaliana	45.91	5.00e-133	467.00
IUUC-Bdi-014709	Brachypodium distachyon	72.47	0.00e+00	897.00
IUUC-Bol-016589	Brassica oleracea	45.62	4.00e-131	460.00
IUUC-Bra-017157	Brassica rapa	46.80	3.00e-127	447.00
IUUC-Cre-022638	Chlamydomonas reinhardtii	29.06	4.00e-22	97.80
IUUC-Mac-064621	Musa acuminata	46.98	5.00e-162	563.00
IUUC-Oba-075132	Oryza barthii	71.59	0.00e+00	904.00
IUUC-Obr-076155	Oryza brachyantha	73.31	0.00e+00	947.00
IUUC-Ogl-077472	Oryza glaberrima	71.59	0.00e+00	904.00
IUUC-Ogu-078784	Oryza glumaepatula	71.59	0.00e+00	903.00
IUUC-Oin-079381	Oryza indica	72.44	0.00e+00	892.00
IUUC-Olo-080345	Oryza longistaminata	72.94	0.00e+00	908.00
IUUC-Ome-081833	Oryza meridionalis	71.55	0.00e+00	899.00
IUUC-Oni-082489	Oryza nivara	71.47	0.00e+00	883.00
IUUC-Opu-083689	Oryza punctata	71.51	0.00e+00	893.00
IUUC-Oru-085238	Oryza rufipogon	71.45	0.00e+00	902.00
IUUC-Osa-085803	Oryza sativa	71.47	0.00e+00	903.00
IUUC-Sit-110308	Setaria italica	90.65	0.00e+00	1216.00
IUUC-Sar-113265	Sorex araneus	27.08	3.00e-21	97.10
IUUC-Tae-125183	Triticum aestivum	71.43	0.00e+00	864.00
IUUC-Tur-126854	Triticum urartu	71.13	0.00e+00	823.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence