iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121435

Ensembl Protein ID

EOY32442

UniProt Accession

A0A061GTD8; A0A061GTD8_THECC

Genbank Protein ID

EOY32442.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001887

Gene Name

TCM_040374

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_040374	EOY32442	EOY32442

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.30e-24	84.2	681	752

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+Cp++++l++dPv+l++G+t++r +I++w+++g++tcPvt+++l+  ++   n  l+r+i++w +en
   Q: 681  IPQDFICPLTGKLFEDPVTLETGQTFERVAIKEWFNQGNRTCPVTGKTLECLSVpLTNFILKRVIDSWKSEN 752
           8************************************************999999*************9987 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASSLEELLA EEGFGGRRSV TRSRSSIRSE AVSKTDSPFS NRVKTERTRS DISRYNLRGE 60
LSRSDSTTGR RPRDYLVRRE KLNGELKKEN KERLEGRGSS DRQEDRWLNI NSSEEFQENE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAATTTAC ATTCATTACC CAGAATGTCA ACCGAGACCC CGCAAGGCTT TAATATCAGC 60
TTCTCATTTC CCCTGTGGGT AGCTGTTTCC AAATACCACA TTTTAAAAGA TTTTAAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	43.46	0.00e+00	674.00
IUUC-Bdi-014999	Brachypodium distachyon	35.83	3.00e-68	252.00
IUUC-Gma-044073	Glycine max	45.98	0.00e+00	827.00
IUUC-Hvu-047722	Hordeum vulgare	40.08	3.00e-73	269.00
IUUC-Lpe-051567	Leersia perrieri	42.83	2.00e-78	286.00
IUUC-Mtr-058670	Medicago truncatula	44.32	0.00e+00	748.00
IUUC-Mac-065130	Musa acuminata	42.99	2.00e-92	333.00
IUUC-Oba-075449	Oryza barthii	41.44	1.00e-78	287.00
IUUC-Obr-076588	Oryza brachyantha	40.24	7.00e-77	281.00
IUUC-Ogu-078984	Oryza glumaepatula	41.01	6.00e-82	298.00
IUUC-Olo-080563	Oryza longistaminata	38.74	7.00e-48	184.00
IUUC-Ome-081747	Oryza meridionalis	35.77	1.00e-80	293.00
IUUC-Oni-082227	Oryza nivara	41.23	1.00e-76	280.00
IUUC-Opu-083803	Oryza punctata	42.95	2.00e-82	300.00
IUUC-Oru-084717	Oryza rufipogon	41.23	3.00e-78	285.00
IUUC-Osa-085390	Oryza sativa	39.62	3.00e-50	192.00
IUUC-Pop-099189	Populus trichocarpa	53.69	0.00e+00	1073.00
IUUC-Ppe-101493	Prunus persica	60.08	4.00e-154	538.00
IUUC-Sit-110010	Setaria italica	34.98	3.00e-59	222.00
IUUC-Stu-112239	Solanum tuberosum	52.42	1.00e-130	459.00
IUUC-Sbi-113947	Sorghum bicolor	36.38	5.00e-77	281.00
IUUC-Tae-125513	Triticum aestivum	40.37	4.00e-84	305.00
IUUC-Tur-126526	Triticum urartu	40.57	8.00e-73	267.00
IUUC-Vvi-130964	Vitis vinifera	53.68	0.00e+00	1020.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence