iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078575

Ensembl Protein ID

OGLUM04G23280.1

UniProt Accession

A0A0D9ZPX8; A0A0D9ZPX8_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G23280	OGLUM04G23280.1	OGLUM04G23280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-32	112.1	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ flCpIs+elM+dPv++++G+tydr+sIe+w+ ++gk tcP t+q+l++ dl+Pn+tl+r+i++w+++ ss
   Q: 5    PPPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKtTCPATMQRLASFDLTPNHTLKRVISSWLDRASS 78
           799********************************998888****************************99876 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MAMEPPPLFL CPISMELMED PVTVATGVTY DRRSIERWFF KYGKTTCPAT MQRLASFDLT 60
PNHTLKRVIS SWLDRASSSS SPSTAGSPAT TTSSSSSNAM ERERLPSVLA GIEETPFKAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATGG AGCCTCCTCC CCTGTTCCTG TGCCCCATCT CGATGGAGCT AATGGAGGAC 60
CCCGTCACGG TGGCCACCGG CGTCACCTAC GACCGCCGGA GCATCGAGCG GTGGTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002928	Amborella trichopoda	41.11	3.00e-87	314.00
IUUC-Bdi-014881	Brachypodium distachyon	70.68	2.00e-128	451.00
IUUC-Hvu-047092	Hordeum vulgare	75.77	4.00e-146	510.00
IUUC-Lpe-051020	Leersia perrieri	81.19	2.00e-176	611.00
IUUC-Mac-064665	Musa acuminata	50.36	4.00e-104	370.00
IUUC-Oba-074977	Oryza barthii	98.76	3.00e-161	560.00
IUUC-Obr-076700	Oryza brachyantha	88.60	0.00e+00	640.00
IUUC-Ogl-077950	Oryza glaberrima	99.29	0.00e+00	734.00
IUUC-Oin-079500	Oryza indica	98.81	0.00e+00	731.00
IUUC-Oni-082805	Oryza nivara	98.81	0.00e+00	731.00
IUUC-Opu-083721	Oryza punctata	94.54	0.00e+00	700.00
IUUC-Oru-084349	Oryza rufipogon	99.05	0.00e+00	733.00
IUUC-Osa-086088	Oryza sativa	98.81	0.00e+00	732.00
IUUC-Ppe-101339	Prunus persica	43.68	4.00e-81	294.00
IUUC-Sit-110629	Setaria italica	77.14	1.00e-157	548.00
IUUC-Sly-111695	Solanum lycopersicum	40.95	4.00e-86	311.00
IUUC-Stu-112376	Solanum tuberosum	41.90	1.00e-87	316.00
IUUC-Sbi-114088	Sorghum bicolor	77.83	6.00e-157	546.00
IUUC-Tae-124754	Triticum aestivum	75.83	1.00e-145	509.00
IUUC-Tur-126771	Triticum urartu	55.45	1.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence