iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112376

Ensembl Protein ID

PGSC0003DMT400004594

UniProt Accession

M0ZNN8; M0ZNN8_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400001821	PGSC0003DMT400004594	PGSC0003DMT400004594

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-28	99.4	4	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawcee 71
           p +f+CpIs+elM+dPv++++G+ty+r++Iekw+ +++k tcP+t+q l++ d++Pn+tl+rli aw + 
   Q: 4    PLHFRCPISMELMKDPVTISTGVTYERKNIEKWFYTCKKkTCPTTMQVLHSFDMTPNHTLKRLILAWQNG 73
           779*******************************777777***************************765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDFPLHFRCP ISMELMKDPV TISTGVTYER KNIEKWFYTC KKKTCPTTMQ VLHSFDMTPN 60
HTLKRLILAW QNGKSQSQSH DELSMKHDEL VSLINTIESS PFKVSSLKKL KSIVELGDHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACAATTCA CAAAGAAAAT ATACCAAAAA TTGTATCAAT TATTCATGGA TTTTCCTCTA 60
CATTTTAGAT GTCCAATCTC CATGGAGCTC ATGAAAGATC CTGTTACAAT CTCTACTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102603086

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002928	Amborella trichopoda	47.19	1.00e-113	402.00
IUUC-Bdi-014881	Brachypodium distachyon	39.48	4.00e-75	273.00
IUUC-Hvu-047092	Hordeum vulgare	43.48	9.00e-78	282.00
IUUC-Lpe-051020	Leersia perrieri	40.28	4.00e-83	300.00
IUUC-Mac-064665	Musa acuminata	46.83	1.00e-108	385.00
IUUC-Oba-075501	Oryza barthii	34.76	2.00e-71	261.00
IUUC-Obr-076700	Oryza brachyantha	41.65	1.00e-82	298.00
IUUC-Ogl-077950	Oryza glaberrima	42.14	5.00e-90	323.00
IUUC-Ogu-078575	Oryza glumaepatula	41.90	5.00e-89	320.00
IUUC-Oin-079500	Oryza indica	41.67	3.00e-88	317.00
IUUC-Ome-081267	Oryza meridionalis	39.43	4.00e-75	273.00
IUUC-Oni-082805	Oryza nivara	41.67	3.00e-88	317.00
IUUC-Opu-083721	Oryza punctata	41.39	5.00e-89	320.00
IUUC-Oru-084349	Oryza rufipogon	41.90	9.00e-89	319.00
IUUC-Osa-086088	Oryza sativa	41.67	3.00e-88	317.00
IUUC-Ppe-101339	Prunus persica	60.65	1.00e-131	461.00
IUUC-Sit-110629	Setaria italica	41.95	7.00e-83	299.00
IUUC-Sly-111695	Solanum lycopersicum	98.04	0.00e+00	778.00
IUUC-Sbi-114088	Sorghum bicolor	42.54	9.00e-89	319.00
IUUC-Tae-124754	Triticum aestivum	43.34	7.00e-77	279.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence