iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001165

Ensembl Protein ID

EMT23706

UniProt Accession

M8CK23; M8CK23_AEGTA

Genbank Protein ID

EMT23706.1

Protein Name

PHD finger protein

Genbank Nucleotide ID

KD519347

Gene Name

F775_29862

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_29862	EMT23706	EMT23706

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.70e-08	34.2	223	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrsk 54
           + C  Cg  ++ e+  + C+ C++w+H +C+k++   + ++ +++ Cp+C+sk
   Q: 223  TLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKIT-PAKAESIKQYKCPSCSSK 274
           689*******************************.888888889******975 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAPSSRRSGA GGGGGSAPRT VEDIFKDYRA RRNAIHRALT HDVEEFYAQC DPVSIQLAAS 60
CPPQIAMCFR VPTEKENLCL YGYANEAWEV ALPAEEVPTE MPEPALGVNF GRAGMKRSDW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCCCT CCTCCCGCCG CTCAGGTGCG GGCGGCGGCG GCGGCTCAGC CCCCCGCACC 60
GTCGAGGACA TCTTCAAGGA CTACCGCGCC CGCCGCAACG CCATCCACCG CGCCCTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0479--Metal-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

ats:F775_29862

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002475	Amborella trichopoda	57.79	2.00e-75	274.00
IUUC-Aca-005148	Anolis carolinensis	47.83	2.00e-09	58.20
IUUC-Aly-005868	Arabidopsis lyrata	50.94	2.00e-60	224.00
IUUC-Ath-007447	Arabidopsis thaliana	50.75	6.00e-60	223.00
IUUC-Ang-009560	Aspergillus niger	54.05	8.00e-07	48.90
IUUC-Ame-010924	Astyanax mexicanus	43.64	2.00e-09	58.90
IUUC-Bdi-014258	Brachypodium distachyon	82.76	3.00e-118	416.00
IUUC-Bol-015692	Brassica oleracea	48.08	2.00e-53	201.00
IUUC-Bra-017743	Brassica rapa	46.44	3.00e-54	204.00
IUUC-Cja-018809	Callithrix jacchus	50.00	1.00e-10	61.20
IUUC-Cpo-021892	Cavia porcellus	50.00	7.00e-10	60.50
IUUC-Cin-025225	Ciona intestinalis	42.55	4.00e-09	56.20
IUUC-Csv-026235	Ciona savignyi	46.51	2.00e-09	55.50
IUUC-Cne-026898	Cryptococcus neoformans	47.50	9.00e-07	49.30
IUUC-Dno-029508	Dasypus novemcinctus	49.06	1.00e-10	62.40
IUUC-Dor-030950	Dipodomys ordii	50.00	1.00e-09	59.70
IUUC-Gma-043719	Glycine max	58.08	2.00e-71	261.00
IUUC-Ggo-045377	Gorilla gorilla	50.00	6.00e-10	59.30
IUUC-Hvu-047100	Hordeum vulgare	89.66	2.00e-130	457.00
IUUC-Itr-048740	Ictidomys tridecemlineatus	50.00	7.00e-10	60.50
IUUC-Kpa-049384	Komagataella pastoris	34.62	7.00e-05	41.60
IUUC-Lpe-050738	Leersia perrieri	79.69	8.00e-114	402.00
IUUC-Mtr-058517	Medicago truncatula	56.54	7.00e-71	259.00
IUUC-Mac-065399	Musa acuminata	63.98	8.00e-83	298.00
IUUC-Oba-075021	Oryza barthii	73.59	4.00e-104	370.00
IUUC-Ogl-077422	Oryza glaberrima	79.31	5.00e-107	379.00
IUUC-Ogu-079021	Oryza glumaepatula	73.59	5.00e-104	369.00
IUUC-Oin-079801	Oryza indica	79.31	1.00e-106	378.00
IUUC-Olo-080963	Oryza longistaminata	72.90	3.00e-53	200.00
IUUC-Ome-081881	Oryza meridionalis	78.93	2.00e-106	377.00
IUUC-Oni-082314	Oryza nivara	79.31	1.00e-106	378.00
IUUC-Opu-083359	Oryza punctata	78.93	8.00e-107	378.00
IUUC-Oru-085108	Oryza rufipogon	77.01	2.00e-94	337.00
IUUC-Osa-086138	Oryza sativa	84.78	4.00e-59	220.00
IUUC-Olu-087829	Ostreococcus lucimarinus	50.32	3.00e-33	134.00
IUUC-Pan-092346	Papio anubis	49.06	4.00e-11	63.20
IUUC-Ppa-095988	Physcomitrella patens	52.92	1.00e-75	275.00
IUUC-Pop-099768	Populus trichocarpa	50.94	1.00e-60	225.00
IUUC-Pca-100922	Procavia capensis	50.00	8.00e-10	60.50
IUUC-Ppe-101614	Prunus persica	58.62	1.00e-69	255.00
IUUC-Sce-106445	Saccharomyces cerevisiae	32.65	3.00e-03	35.80
IUUC-Smo-109237	Selaginella moellendorffii	43.68	3.00e-49	187.00
IUUC-Sit-110822	Setaria italica	57.96	8.00e-40	156.00
IUUC-Sly-111705	Solanum lycopersicum	55.77	1.00e-70	258.00
IUUC-Stu-112072	Solanum tuberosum	55.38	4.00e-70	256.00
IUUC-Ssc-115645	Sus scrofa	45.00	5.00e-07	49.70
IUUC-Tgu-117339	Taeniopygia guttata	47.83	9.00e-10	58.50
IUUC-Tca-121204	Theobroma cacao	61.54	6.00e-73	266.00
IUUC-Tae-124170	Triticum aestivum	90.42	2.00e-121	427.00
IUUC-Vpa-130338	Vicugna pacos	50.00	7.00e-10	60.50
IUUC-Vvi-131738	Vitis vinifera	57.20	1.00e-74	271.00
IUUC-Yli-134626	Yarrowia lipolytica	42.11	2.00e-04	40.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence