iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111867

Ensembl Protein ID

Solyc11g005030.1.1

UniProt Accession

K4D4B6; K4D4B6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g005030.1	Solyc11g005030.1.1	Solyc11g005030.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-23	82.0	201	235
UBD/Beta-Prp	7.30e-43	147.6	163	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
           gH++ v++la  d  l sGs+Dgt+++W l+++ +
   Q: 201  GHKSVVSSLAICDEVLYSGSWDGTVRLWCLSDHSP 235
           8**********6799*************9988766 PP

UBD/Beta-Prp

   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.ssvisv 270
           + ++ l+f+  +++l +gs d+++k w+lq  +   t+ngh++ v+s++ +  de l+sgs Dg++r+W l    +l +l  ++  sv sv
   Q: 163  SGIHALAFSA-SQYLYTGSGDKSIKAWSLQDYSLSCTMNGHKSVVSSLAIC--DEVLYSGSWDGTVRLWCLSDHSPLAVLGEEApGSVCSV 250
           5688999999.68*****************9999*****************..****************8888888888888888999999 PP
   S: 271  avlsfgdnvlvlgsedskvniw 292
            +l +++nvlv++ e++  +iw
   Q: 251  FCLAVDENVLVAAYENGLTKIW 272
           99***************99999 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MENMCNCLIL EDLCQSINKV TKESPRCLDD TSVVENANTE EAEGVENFGA NKDVVEGLSC 60
GQVKCIDLKG HRNCITGLAI GGGFLFSSSF DKMVNVWSLQ DYSHVHSFKG HEQRVMAVAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAACA TGTGTAATTG CTTAATTCTT GAAGACTTGT GTCAGTCAAT CAATAAGGTT 60
ACTAAAGAAT CACCGAGGTG CCTTGATGAT ACTTCTGTGG TGGAAAATGC AAACACAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	35.81	3.00e-48	185.00
IUUC-Atr-003105	Amborella trichopoda	54.61	8.00e-87	314.00
IUUC-Aly-006480	Arabidopsis lyrata	42.76	2.00e-56	214.00
IUUC-Ath-007227	Arabidopsis thaliana	52.42	1.00e-99	357.00
IUUC-Bdi-015002	Brachypodium distachyon	52.03	3.00e-85	309.00
IUUC-Bol-015912	Brassica oleracea	58.17	5.00e-102	364.00
IUUC-Bra-017564	Brassica rapa	53.71	3.00e-105	375.00
IUUC-Gma-043879	Glycine max	51.71	1.00e-102	367.00
IUUC-Hvu-047671	Hordeum vulgare	53.98	4.00e-91	328.00
IUUC-Lpe-051223	Leersia perrieri	47.83	6.00e-84	304.00
IUUC-Mtr-058342	Medicago truncatula	58.33	1.00e-94	338.00
IUUC-Mac-065113	Musa acuminata	52.79	7.00e-104	370.00
IUUC-Oba-075807	Oryza barthii	47.78	2.00e-92	333.00
IUUC-Obr-076101	Oryza brachyantha	47.77	6.00e-92	331.00
IUUC-Ogl-077321	Oryza glaberrima	45.29	4.00e-90	325.00
IUUC-Ogu-078456	Oryza glumaepatula	47.79	5.00e-93	334.00
IUUC-Oin-079822	Oryza indica	48.04	8.00e-93	334.00
IUUC-Olo-080336	Oryza longistaminata	52.88	2.00e-91	329.00
IUUC-Ome-081976	Oryza meridionalis	52.49	3.00e-93	335.00
IUUC-Oni-082359	Oryza nivara	48.03	9.00e-92	330.00
IUUC-Opu-083757	Oryza punctata	49.39	9.00e-91	327.00
IUUC-Oru-085207	Oryza rufipogon	48.18	3.00e-92	332.00
IUUC-Osa-085546	Oryza sativa	47.94	2.00e-41	163.00
IUUC-Ppa-095665	Physcomitrella patens	38.91	3.00e-51	196.00
IUUC-Pop-098862	Populus trichocarpa	56.46	2.00e-114	405.00
IUUC-Ppe-101295	Prunus persica	56.11	7.00e-114	404.00
IUUC-Smo-109481	Selaginella moellendorffii	37.86	2.00e-45	177.00
IUUC-Sit-110599	Setaria italica	51.45	8.00e-91	327.00
IUUC-Stu-112296	Solanum tuberosum	94.93	0.00e+00	699.00
IUUC-Sbi-114828	Sorghum bicolor	51.32	2.00e-90	326.00
IUUC-Tca-121601	Theobroma cacao	61.42	3.00e-114	405.00
IUUC-Tae-125330	Triticum aestivum	52.32	2.00e-91	329.00
IUUC-Tur-126303	Triticum urartu	53.72	5.00e-93	334.00
IUUC-Vvi-130947	Vitis vinifera	61.93	7.00e-123	434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence