iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114083

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G043000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g003790	Sb10g003790.1	Sb10g003790.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	47.28	1.00e-160	563.00	IUUC-Ath-007057
E3 adaptor/Cullin RING/SCF/F-box	77.39	0.00e+00	977.00	IUUC-Osa-085680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEDAAAGSP LLDLPEPLLL HILGFLTDAR SRHRVALACH RLLAAERATR AALSLRGDPR 60
SDVFLYLIRP TFCFPALERL DLSLVSPWGH PFLSSAAPSA DAVAPAVAAE EVAGQNALIA 120

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Nucleotide Sequence
(Fasta)

CCGGCGCTCA CCTGCTGCCG CAGGCCGCAT CCCCCCTCTC CTCCTCCTCC TCCTCCCCCC 60
AACTGCCCCC CGCTCCGCCC GCGCAAGGGA AAGGAAAAAA GGGCTCGACG ACTTTGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0009926--P:auxin polar transport
GO:0042335--P:cuticle development
GO:0010187--P:negative regulation of seed germination
GO:1902584--P:positive regulation of response to water deprivation
GO:0009934--P:regulation of meristem structural organization
GO:0009416--P:response to light stimulus
GO:0009414--P:response to water deprivation
GO:0010016--P:shoot system morphogenesis

KEGG

sbi:SORBI_10g003790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000912	Aegilops tauschii	76.54	5.00e-161	560.00
IUUC-Atr-002917	Amborella trichopoda	45.57	8.00e-144	503.00
IUUC-Aly-006349	Arabidopsis lyrata	46.87	2.00e-156	545.00
IUUC-Ath-007057	Arabidopsis thaliana	47.08	8.00e-169	586.00
IUUC-Bdi-014544	Brachypodium distachyon	79.82	0.00e+00	1000.00
IUUC-Bol-016586	Brassica oleracea	46.89	2.00e-167	582.00
IUUC-Bra-017251	Brassica rapa	47.48	5.00e-172	597.00
IUUC-Gma-043976	Glycine max	46.85	5.00e-163	566.00
IUUC-Hvu-047568	Hordeum vulgare	76.44	0.00e+00	791.00
IUUC-Lpe-051227	Leersia perrieri	83.76	0.00e+00	661.00
IUUC-Mtr-058145	Medicago truncatula	47.04	2.00e-170	591.00
IUUC-Mac-064499	Musa acuminata	56.42	2.00e-79	288.00
IUUC-Oba-075679	Oryza barthii	78.06	0.00e+00	1028.00
IUUC-Obr-076462	Oryza brachyantha	72.54	0.00e+00	885.00
IUUC-Ogu-078600	Oryza glumaepatula	76.97	0.00e+00	1036.00
IUUC-Oin-079216	Oryza indica	81.01	0.00e+00	826.00
IUUC-Olo-080841	Oryza longistaminata	79.69	0.00e+00	820.00
IUUC-Ome-081978	Oryza meridionalis	81.04	3.00e-151	527.00
IUUC-Oni-082511	Oryza nivara	81.87	0.00e+00	810.00
IUUC-Opu-083879	Oryza punctata	81.55	0.00e+00	793.00
IUUC-Oru-084189	Oryza rufipogon	81.87	0.00e+00	809.00
IUUC-Osa-085680	Oryza sativa	77.39	0.00e+00	1023.00
IUUC-Ppa-095907	Physcomitrella patens	38.03	2.00e-65	243.00
IUUC-Pop-099037	Populus trichocarpa	46.72	2.00e-161	561.00
IUUC-Ppe-101483	Prunus persica	47.34	5.00e-165	573.00
IUUC-Smo-109407	Selaginella moellendorffii	43.55	3.00e-122	431.00
IUUC-Sit-110373	Setaria italica	89.23	0.00e+00	1137.00
IUUC-Sly-111608	Solanum lycopersicum	45.43	5.00e-165	573.00
IUUC-Stu-112390	Solanum tuberosum	48.25	1.00e-176	612.00
IUUC-Tca-120984	Theobroma cacao	48.23	4.00e-167	580.00
IUUC-Tae-124517	Triticum aestivum	74.23	0.00e+00	917.00
IUUC-Tur-126493	Triticum urartu	74.39	1.00e-124	438.00
IUUC-Vvi-131051	Vitis vinifera	48.04	1.00e-170	592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence