iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112480

Ensembl Protein ID

PGSC0003DMT400004842

UniProt Accession

M0ZP22; M0ZP22_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400001922	PGSC0003DMT400004842	PGSC0003DMT400004842

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-31	107.4	335	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH+ s+ cla  s++ll+sGs D+t+++W 
   Q: 335  GHKKSILCLAVvSNDLLCSGSADKTVRIWK 364
           8*********9988***************7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGFLPCCLPC QSKKKPLDSS DQTQCRHLPS NSSSSLISLS SRSLSLSLSS RSFSSQPSLP 60
SIPSLSISSS QVEYLSNTFH HCLATLTVHS SYIFCLSIVE KHLYYGSSNG EILVWDINPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAATGG GATTTCTTCC ATGTTGTTTG CCTTGTCAAT CAAAGAAAAA ACCATTAGAT 60
TCTTCTGATC AAACTCAGTG TAGACATCTT CCCTCAAATT CTTCATCATC ATTAATATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102602577

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006722	Arabidopsis thaliana	58.86	2.00e-106	378.00
IUUC-Bol-016325	Brassica oleracea	58.17	2.00e-100	357.00
IUUC-Bra-018099	Brassica rapa	59.44	4.00e-112	396.00
IUUC-Hvu-047304	Hordeum vulgare	45.22	8.00e-85	306.00
IUUC-Lpe-050736	Leersia perrieri	46.30	1.00e-87	315.00
IUUC-Mac-065157	Musa acuminata	53.41	1.00e-93	335.00
IUUC-Obr-076628	Oryza brachyantha	42.86	4.00e-84	304.00
IUUC-Ogl-076961	Oryza glaberrima	45.03	6.00e-76	276.00
IUUC-Ogu-078745	Oryza glumaepatula	45.17	8.00e-82	296.00
IUUC-Oin-079355	Oryza indica	45.03	2.00e-75	275.00
IUUC-Olo-080540	Oryza longistaminata	43.58	8.00e-72	262.00
IUUC-Ome-081476	Oryza meridionalis	45.38	7.00e-77	279.00
IUUC-Oni-082952	Oryza nivara	45.17	5.00e-75	273.00
IUUC-Opu-083271	Oryza punctata	44.77	2.00e-81	294.00
IUUC-Oru-084480	Oryza rufipogon	44.76	1.00e-74	272.00
IUUC-Osa-086252	Oryza sativa	44.76	9.00e-75	272.00
IUUC-Sit-109950	Setaria italica	48.64	6.00e-79	286.00
IUUC-Sly-111917	Solanum lycopersicum	89.33	0.00e+00	681.00
IUUC-Tae-122815	Triticum aestivum	45.79	3.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence