iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076559

Ensembl Protein ID

OB01G34350.1

UniProt Accession

J3L2H9; J3L2H9_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G34350	OB01G34350.1	OB01G34350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-13	51.2	94	130

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H + v+ + f  d +ll+sGsdD t  +W++ +g+++
   Q: 94   HGGFVNTIGFnGDgNLLLSGSDDRTAVLWNWQDGTPT 130
           77789999999667*****************999875 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MPKIETSRGS TRARKRKGDS PWTAATRATR REETLASLRR RKKKKAMVPR EGTRMAGLRE 60
REVGRIPPKL FANSVMASQD FVRSLGLQKR LRKHGGFVNT IGFNGDGNLL LSGSDDRTAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCAAGA TTGAGACATC AAGGGGGAGC ACTAGGGCAA GGAAGAGGAA GGGAGACTCA 60
CCATGGACGG CGGCGACGCG GGTGCGGAGA GGGCAAGGGG GGCTAGGGTT TGGGTGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000451	Aegilops tauschii	57.03	1.00e-109	389.00
IUUC-Bdi-014212	Brachypodium distachyon	61.15	1.00e-135	475.00
IUUC-Hvu-047472	Hordeum vulgare	58.66	3.00e-121	427.00
IUUC-Lpe-051029	Leersia perrieri	73.76	5.00e-176	610.00
IUUC-Oba-075210	Oryza barthii	76.49	0.00e+00	629.00
IUUC-Ogl-076983	Oryza glaberrima	75.79	0.00e+00	632.00
IUUC-Ogu-078700	Oryza glumaepatula	76.04	0.00e+00	632.00
IUUC-Oin-080109	Oryza indica	75.79	0.00e+00	632.00
IUUC-Olo-080889	Oryza longistaminata	75.99	1.00e-180	624.00
IUUC-Oni-083050	Oryza nivara	76.49	0.00e+00	629.00
IUUC-Opu-083676	Oryza punctata	77.58	2.00e-180	625.00
IUUC-Oru-084681	Oryza rufipogon	76.04	0.00e+00	632.00
IUUC-Osa-086027	Oryza sativa	76.04	0.00e+00	634.00
IUUC-Sit-110699	Setaria italica	63.41	1.00e-152	532.00
IUUC-Sbi-113849	Sorghum bicolor	59.85	2.00e-131	461.00
IUUC-Tae-123540	Triticum aestivum	59.25	5.00e-123	433.00
IUUC-Tur-126059	Triticum urartu	56.72	2.00e-109	388.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence