iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114737

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G129000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g011130	Sb02g011130.1	Sb02g011130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.9	303	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++ lpC+H+fh +C+ kw         +++CPlC+
   Q: 303  CCICLCPYEDGveLRELPCNHHFHCSCIDKW------LHINATCPLCK 344
           ********9994455699*************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASTSPRRSS GGDPPSPSTP LISSPTSPAS GPSGGGPLGR LTSLRGAARF IRRTGSRRLM 60
REPSVAVRET AAEHLEERQT DWAYSKPVVV LDMLWNLAFV AVAAAVLAAS TGESPAVPLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGGCCGC CCCCAAAAAC CACGCTAATC ACAGGGAGAA GAGGAGAAAA GGAGAGAAAA 60
AAAAAGTGCT AGGGTTTGGC TAATTGGCTC CCGCCATGGC GTCAACCTCT CCGCGCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g011130

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002539	Amborella trichopoda	67.28	2.00e-101	361.00
IUUC-Ath-007048	Arabidopsis thaliana	63.13	6.00e-101	360.00
IUUC-Bdi-014105	Brachypodium distachyon	86.15	5.00e-139	486.00
IUUC-Bol-015362	Brassica oleracea	58.02	2.00e-100	358.00
IUUC-Gma-043207	Glycine max	63.77	6.00e-99	353.00
IUUC-Lpe-051052	Leersia perrieri	86.64	2.00e-127	447.00
IUUC-Mac-064494	Musa acuminata	69.23	6.00e-117	413.00
IUUC-Oba-075681	Oryza barthii	87.34	2.00e-130	457.00
IUUC-Obr-076466	Oryza brachyantha	91.94	7.00e-88	315.00
IUUC-Ogu-078703	Oryza glumaepatula	86.73	3.00e-129	453.00
IUUC-Oin-079121	Oryza indica	87.01	6.00e-130	456.00
IUUC-Olo-080549	Oryza longistaminata	92.35	3.00e-95	340.00
IUUC-Oni-082156	Oryza nivara	87.34	2.00e-130	457.00
IUUC-Opu-083908	Oryza punctata	86.50	6.00e-129	452.00
IUUC-Oru-084913	Oryza rufipogon	87.34	2.00e-130	457.00
IUUC-Osa-086100	Oryza sativa	87.34	2.00e-130	457.00
IUUC-Ppa-095516	Physcomitrella patens	60.77	3.00e-97	347.00
IUUC-Pop-099381	Populus trichocarpa	66.46	7.00e-99	353.00
IUUC-Smo-109047	Selaginella moellendorffii	62.87	3.00e-99	353.00
IUUC-Sit-110740	Setaria italica	95.13	1.00e-141	495.00
IUUC-Sly-111350	Solanum lycopersicum	61.76	1.00e-90	325.00
IUUC-Stu-112030	Solanum tuberosum	61.81	4.00e-103	367.00
IUUC-Tca-121775	Theobroma cacao	61.94	4.00e-105	373.00
IUUC-Vda-129915	Verticillium dahliae	37.65	2.00e-10	60.10
IUUC-Vvi-131280	Vitis vinifera	67.81	9.00e-105	372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence