iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114774

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G428800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g043880	Sb02g043880.1	Sb02g043880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E1	8.30e-170	566.2	461	948

Active Site

Position(s)	Description	Evidence
629	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU10132}

Domain Profile

   S: 1    YDRQirlwGeeaqeklksakvllvGagglGcEllKnLvlaGv.....gsitvvDmdtvevsnlnrqFLfraedvgksKAevaaealkelnpdvnve 91
           YD Q+ ++G++ q+k+  a++++vG g+lGcE+lKnL+l+Gv     g++t++D+d +e+snl+rqFLfr++++g+ K+ vaa+a+  +np+ +++
   Q: 461  YDAQVSVFGSKLQKKMLDANIFIVGSGALGCEFLKNLALMGVscsskGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAAAAIAINPSLQID 556
           ************************************************************************************************ PP
   S: 92   aheesiteleeeiv...FfkkfdvVvlaldnrearrkvnrlclnarvpliesgtlGllGqvrviikgltecyscsddppqktiPfctlketpnaae 184
           a +++ ++++e+++   F + +dvV++aldn+ ar++++ +cl+ ++pl+esgtlG + +++ +i++lte y +s+dpp+k++P+ct+ ++p +++
   Q: 557  ALQNRASPDTENVFhdtFWDGLDVVINALDNVNARMYMDMRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNID 652
           ************8899999999************************************************************************** PP
   S: 185  htiewa............vlfnklleeeageeevlekldseekeegkdkvkselksedeenfeeaieiavkafakttinsikqllksfecdivtks 268
           h+++wa              +n +l++ a+      k   ++ +e +++v++ l +e+ ++fe++i++a+  f+ +++n +kql+  f+ d  t+ 
   Q: 653  HCLTWArsefegllektpNEVNSFLSNPAQYAAAMRKAGDAQARELLERVSECLDKERCNTFEDCITWARLRFEDYFSNRVKQLTFTFPEDAATST 748
           ****************999999999999999999999*********************************************************** PP
   S: 269  kspfwv......................................................sfcsnaealqvpekvekdeevvkasap.....lyll 305
           ++pfw+                                                       +++++ ++ v+  ++++ +++++++      +  l
   Q: 749  GTPFWSapkrfprplqfsatdsshinfimaasilraesfgiaipdwaknaskladavdkvAVPKFEPKKGVNIVTDEKATNLSSASVddvavINDL 844
           ********************************************9999888666666665444444444444444444444333333676788999 PP
   S: 306  lralerfekk..kgrkpgelsfekddds..avdlvtaaanlraeslgiepkldddlikeiagniipaiattnavvgGlaaqEviKvvsg..kfepl 395
           l++le+ +k   +g +++ ++fekddd   ++dl++ +an+ra +++i++ +d+ + k iag+iipaiat +a+  Gl+++E++Kv+ g  + e +
   Q: 845  LTKLEEYAKGlpPGFQMKPIQFEKDDDTnfHMDLIAGFANMRARNYSIPE-VDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGehPIEDY 939
           99999999975589************************************.**************************************999999* PP
   S: 396  knfflfdae 404
           +n+f ++a+
   Q: 940  RNTFANLAL 948
           ****99875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRCLRFLRRG FLAMLPSKRS AGADGGESKR AKLGESPSSA AAAVGTASNG TRNGAAPEID 60
EDLHSRQLAV YGRETMRRLF AADVLVSGLN GLGAEIAKNL ALAGVKSVTI HDVKMVEMWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGTGCT TACGGTTTCT GCGCAGGGGT TTCCTTGCTA TGCTTCCATC CAAGAGGTCC 60
GCGGGCGCCG ACGGCGGCGA GTCCAAGAGG GCTAAGCTGG GGGAATCGCC ATCCTCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0436--Ligase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR032420--E1_4HB
IPR032418--E1_FCCH
IPR016040--NAD(P)-bd_dom
IPR000594--ThiF_NAD_FAD-bd
IPR018965--Ub-activating_enz_E1_C
IPR019572--UBA_E1_Cys
IPR018075--UBQ-activ_enz_E1
IPR018074--UBQ-activ_enz_E1_CS
IPR033127--UBQ-activ_enz_E1_Cys_AS
IPR000011--UBQ/SUMO-activ_enz_E1-like

PROSITE

PS00536--UBIQUITIN_ACTIVAT_1
PS00865--UBIQUITIN_ACTIVAT_2

Pfam

PF16191--E1_4HB
PF16190--E1_FCCH
PF09358--E1_UFD
PF00899--ThiF
PF10585--UBA_e1_thiolCys

PRINTS

PR01849--UBIQUITINACT

SMART

SM00985--UBA_e1_C

Gene Ontology

GO:0005524--F:ATP binding
GO:0008641--F:small protein activating enzyme activity
GO:0006464--P:cellular protein modification process

KEGG

sbi:SORBI_02g043650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000144	Aegilops tauschii	88.80	0.00e+00	1835.00
IUUC-Ago-007873	Ashbya gossypii	45.80	0.00e+00	835.00
IUUC-Bdi-014009	Brachypodium distachyon	85.84	0.00e+00	1788.00
IUUC-Cre-022702	Chlamydomonas reinhardtii	59.98	0.00e+00	1201.00
IUUC-Cme-027290	Cyanidioschyzon merolae	38.91	0.00e+00	698.00
IUUC-Ggr-039823	Gaeumannomyces graminis	45.39	0.00e+00	880.00
IUUC-Hvu-047191	Hordeum vulgare	88.70	0.00e+00	1838.00
IUUC-Lpe-051299	Leersia perrieri	87.19	0.00e+00	1870.00
IUUC-Mor-057269	Magnaporthe oryzae	45.53	0.00e+00	863.00
IUUC-Mpo-057435	Magnaporthe poae	45.39	0.00e+00	856.00
IUUC-Mvi-060437	Microbotryum violaceum	44.11	0.00e+00	830.00
IUUC-Oba-075934	Oryza barthii	89.53	0.00e+00	1870.00
IUUC-Obr-076244	Oryza brachyantha	87.09	0.00e+00	1797.00
IUUC-Ogl-077762	Oryza glaberrima	87.36	0.00e+00	1893.00
IUUC-Ogu-078305	Oryza glumaepatula	89.43	0.00e+00	1870.00
IUUC-Oin-080154	Oryza indica	87.45	0.00e+00	1895.00
IUUC-Olo-081089	Oryza longistaminata	87.64	0.00e+00	1901.00
IUUC-Ome-081171	Oryza meridionalis	83.53	0.00e+00	1740.00
IUUC-Oni-082447	Oryza nivara	87.18	0.00e+00	1876.00
IUUC-Opu-083863	Oryza punctata	89.13	0.00e+00	1858.00
IUUC-Oru-084469	Oryza rufipogon	89.73	0.00e+00	1874.00
IUUC-Osa-085625	Oryza sativa	87.56	0.00e+00	1875.00
IUUC-Olu-087687	Ostreococcus lucimarinus	59.98	0.00e+00	1145.00
IUUC-Pma-094214	Petromyzon marinus	46.43	1.00e-33	135.00
IUUC-Sit-110294	Setaria italica	92.68	0.00e+00	2049.00
IUUC-Tae-125702	Triticum aestivum	86.33	0.00e+00	1899.00
IUUC-Tur-126011	Triticum urartu	86.06	0.00e+00	1816.00
IUUC-Xtr-132026	Xenopus tropicalis	39.05	0.00e+00	640.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence