iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114382

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G211900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g025520	Sb02g025520.1	Sb02g025520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.5	244	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e +  +d    lpC+H+fh  Cl+ w         + +CP+Cr
   Q: 244  CAVCRENLvvDDKMQELPCKHLFHPPCLKPW------LDENNSCPICR 285
           ******9988555778***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSATATDEAA VEARLQALRQ RLGKKQHFEE AVNELAAAVR DRYAGASPTL RKSMYSTVCR 60
VATVLQTRYT APGFWRAGLN LFMGTEKLVS NPAEKEHLKT CISRAREHLD EKENEDSMPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGGCGCCC ACCTCCGGCA TCGGCCTTCT CTCCTTTTTA TACCTCCGCC GCGGCGACGC 60
ACGCCAGCCA ACCTTCGATT CCCAATCCTC CCTACCTATA ACCCCCCAAA ACTCTCGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g025520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000652	Aegilops tauschii	74.86	1.00e-136	479.00
IUUC-Atr-002467	Amborella trichopoda	78.57	2.00e-42	163.00
IUUC-Aly-005810	Arabidopsis lyrata	53.54	1.00e-79	288.00
IUUC-Ath-007091	Arabidopsis thaliana	53.85	2.00e-79	288.00
IUUC-Bdi-014952	Brachypodium distachyon	83.89	2.00e-143	501.00
IUUC-Bol-016249	Brassica oleracea	56.04	3.00e-82	297.00
IUUC-Bra-017222	Brassica rapa	54.18	1.00e-76	279.00
IUUC-Gma-043044	Glycine max	57.95	1.00e-84	305.00
IUUC-Hvu-047837	Hordeum vulgare	85.50	1.00e-91	327.00
IUUC-Lpe-051691	Leersia perrieri	79.75	5.00e-138	482.00
IUUC-Meu-056394	Macropus eugenii	41.94	2.00e-16	80.10
IUUC-Mtr-057776	Medicago truncatula	55.85	9.00e-85	305.00
IUUC-Mac-064671	Musa acuminata	64.22	6.00e-113	399.00
IUUC-Oba-075555	Oryza barthii	80.19	8.00e-135	472.00
IUUC-Obr-076610	Oryza brachyantha	80.38	3.00e-144	503.00
IUUC-Ogl-077481	Oryza glaberrima	80.19	8.00e-135	472.00
IUUC-Ogu-078564	Oryza glumaepatula	79.87	1.00e-133	468.00
IUUC-Oin-079836	Oryza indica	80.50	8.00e-135	472.00
IUUC-Olo-080714	Oryza longistaminata	82.05	3.00e-123	433.00
IUUC-Ome-081489	Oryza meridionalis	80.37	9.00e-137	479.00
IUUC-Oni-082870	Oryza nivara	80.50	8.00e-135	472.00
IUUC-Opu-083573	Oryza punctata	79.45	2.00e-141	493.00
IUUC-Oru-084631	Oryza rufipogon	80.50	8.00e-135	472.00
IUUC-Osa-086256	Oryza sativa	79.08	6.00e-135	472.00
IUUC-Ppa-095370	Physcomitrella patens	44.81	8.00e-67	246.00
IUUC-Pop-100000	Populus trichocarpa	55.89	5.00e-86	310.00
IUUC-Ppe-101308	Prunus persica	55.56	2.00e-91	328.00
IUUC-Smo-109096	Selaginella moellendorffii	45.43	4.00e-61	227.00
IUUC-Sit-109993	Setaria italica	92.28	6.00e-160	555.00
IUUC-Sly-111289	Solanum lycopersicum	56.07	2.00e-88	318.00
IUUC-Stu-112307	Solanum tuberosum	56.15	1.00e-76	278.00
IUUC-Sar-113270	Sorex araneus	45.07	3.00e-14	73.20
IUUC-Tca-121281	Theobroma cacao	58.00	4.00e-85	306.00
IUUC-Tae-124788	Triticum aestivum	84.57	2.00e-145	507.00
IUUC-Tur-126002	Triticum urartu	73.57	4.00e-86	310.00
IUUC-Vvi-131628	Vitis vinifera	53.64	3.00e-76	277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence