iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016771

Ensembl Protein ID

Bra037289.1-P

UniProt Accession

M4F878; M4F878_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra037289	Bra037289.1	Bra037289.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-34	116.1	215	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gH++ v ++a+   +++l+ s++dDg + +WD+rt+
   Q: 215  GHECAVEDVAWhmkNENLFGSAGDDGRLVIWDTRTN 250
           8************766****************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAEEGKEDAG MDQVEEDFSI WKKNTPFLYD LMISNPLEWP SLTVHWVPSP PSPYAADPHF 60
GVHKLILGTH TSGDAQDFLM VADAVIPTPD AEPGLGGTNQ DPIVPKVEIR QKIRVDGEVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG AAGGTAAGGA GGATGCTGGA ATGGATCAGG TAGAGGAGGA TTTCTCTATA 60
TGGAAGAAGA ACACACCGTT CCTCTACGAC CTCATGATCT CCAACCCTCT CGAGTGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005708	Arabidopsis lyrata	92.73	0.00e+00	784.00
IUUC-Ath-007342	Arabidopsis thaliana	91.48	0.00e+00	776.00
IUUC-Bol-016584	Brassica oleracea	98.55	0.00e+00	792.00
IUUC-Mtr-058292	Medicago truncatula	62.30	3.00e-139	487.00
IUUC-Mac-065473	Musa acuminata	61.36	8.00e-123	433.00
IUUC-Ogu-078437	Oryza glumaepatula	56.10	6.00e-111	394.00
IUUC-Oin-079872	Oryza indica	56.62	2.00e-112	398.00
IUUC-Oni-082852	Oryza nivara	56.62	2.00e-112	398.00
IUUC-Opu-083343	Oryza punctata	54.43	7.00e-108	383.00
IUUC-Pop-099884	Populus trichocarpa	72.25	1.00e-176	612.00
IUUC-Ppe-101659	Prunus persica	71.93	2.00e-162	564.00
IUUC-Sly-111542	Solanum lycopersicum	72.02	5.00e-161	560.00
IUUC-Stu-112318	Solanum tuberosum	71.32	2.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence