iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095499

Ensembl Protein ID

PP1S54_103V6.1

UniProt Accession

A9S7J0; A9S7J0_PHYPA

Genbank Protein ID

EDQ72848.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

DS544943

Gene Name

HIRA1502; PHYPADRAFT_209418

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S54_103V6	PP1S54_103V6.1	PP1S54_103V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-22	78.4	121	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v +l + +d t l+s+s D++i++W ++tg l
   Q: 121  GHSADVVDLGWsPDdTQLASCSLDNSIRIWQTSTGAL 157
           8***********777****************999876 PP

Organism

Physcomitrella patens

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MIVEKPTWLR HAGLQIFSVD TQPNGLRFAT AGGDHKVRIW NMKPLAEKET DSDTKLLATL 60
RDHFGSVNCV RWAKCGQKIA SGSDDQVVYI HEKRPGSGTT EFGSGEPPDV ENWKVLLTLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGTGG AAAAGCCTAC GTGGTTGCGC CATGCCGGAC TCCAGATTTT CTCCGTCGAC 60
ACGCAGCCCA ATGGCCTACG CTTCGCCACA GCCGGAGGGG ATCACAAGGT ATTCACATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000790--C:nuclear chromatin
GO:0031491--F:nucleosome binding
GO:0003714--F:transcription corepressor activity
GO:0016569--P:covalent chromatin modification
GO:0006336--P:DNA replication-independent nucleosome assembly
GO:0031935--P:regulation of chromatin silencing
GO:0006351--P:transcription, DNA-templated

KEGG

ppp:PHYPADRAFT_209418

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	47.89	0.00e+00	923.00
IUUC-Atr-003132	Amborella trichopoda	51.75	0.00e+00	973.00
IUUC-Afl-008591	Aspergillus flavus	34.25	2.00e-70	260.00
IUUC-Ani-009272	Aspergillus nidulans	25.75	6.00e-76	278.00
IUUC-Aor-010119	Aspergillus oryzae	34.25	2.00e-70	260.00
IUUC-Ate-010530	Aspergillus terreus	27.75	9.00e-55	208.00
IUUC-Bdi-014075	Brachypodium distachyon	50.15	0.00e+00	953.00
IUUC-Bol-016440	Brassica oleracea	49.17	0.00e+00	912.00
IUUC-Cin-025182	Ciona intestinalis	34.50	6.00e-83	301.00
IUUC-Csv-026154	Ciona savignyi	34.73	7.00e-81	295.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	34.26	1.00e-67	250.00
IUUC-Cne-026891	Cryptococcus neoformans	40.67	2.00e-80	293.00
IUUC-Dse-031334	Dothistroma septosporum	35.50	1.00e-70	261.00
IUUC-Ete-032384	Echinops telfairi	32.30	2.00e-61	230.00
IUUC-Fso-038409	Fusarium solani	26.90	7.00e-91	328.00
IUUC-Ggr-040016	Gaeumannomyces graminis	35.42	1.00e-71	264.00
IUUC-Gma-044252	Glycine max	51.08	0.00e+00	967.00
IUUC-Hvu-047587	Hordeum vulgare	49.32	0.00e+00	879.00
IUUC-Lpe-051209	Leersia perrieri	48.59	0.00e+00	920.00
IUUC-Lma-053237	Leptosphaeria maculans	34.86	2.00e-67	250.00
IUUC-Mor-057090	Magnaporthe oryzae	33.03	2.00e-71	263.00
IUUC-Mpo-057364	Magnaporthe poae	35.42	2.00e-72	266.00
IUUC-Mtr-057744	Medicago truncatula	51.70	0.00e+00	971.00
IUUC-Mla-058914	Melampsora laricipopulina	34.99	2.00e-65	243.00
IUUC-Mvi-060432	Microbotryum violaceum	32.92	3.00e-58	219.00
IUUC-Mmr-060871	Microcebus murinus	35.48	4.00e-85	309.00
IUUC-Mac-065137	Musa acuminata	49.41	0.00e+00	902.00
IUUC-Ont-072105	Oreochromis niloticus	34.53	9.00e-79	288.00
IUUC-Oba-075178	Oryza barthii	50.15	0.00e+00	939.00
IUUC-Obr-076399	Oryza brachyantha	49.80	0.00e+00	941.00
IUUC-Ogu-078797	Oryza glumaepatula	50.15	0.00e+00	939.00
IUUC-Oin-080085	Oryza indica	49.49	0.00e+00	871.00
IUUC-Olo-081048	Oryza longistaminata	67.99	2.00e-138	486.00
IUUC-Ome-081324	Oryza meridionalis	50.05	0.00e+00	940.00
IUUC-Oni-082548	Oryza nivara	50.25	0.00e+00	940.00
IUUC-Opu-084008	Oryza punctata	67.54	1.00e-176	613.00
IUUC-Oru-084339	Oryza rufipogon	50.15	0.00e+00	939.00
IUUC-Osa-085782	Oryza sativa	50.15	0.00e+00	939.00
IUUC-Pno-094985	Phaeosphaeria nodorum	31.31	4.00e-59	222.00
IUUC-Pop-099587	Populus trichocarpa	51.42	0.00e+00	926.00
IUUC-Ppe-101261	Prunus persica	50.20	0.00e+00	950.00
IUUC-Pgr-103660	Puccinia graminis	35.36	6.00e-62	231.00
IUUC-Ptt-103900	Puccinia triticina	34.83	1.00e-60	226.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	34.33	4.00e-69	256.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	34.69	2.00e-74	273.00
IUUC-Sit-110730	Setaria italica	50.29	0.00e+00	937.00
IUUC-Sly-111547	Solanum lycopersicum	50.24	0.00e+00	923.00
IUUC-Stu-112705	Solanum tuberosum	51.62	0.00e+00	934.00
IUUC-Sbi-114272	Sorghum bicolor	50.39	0.00e+00	944.00
IUUC-Sre-115061	Sporisorium reilianum	34.72	6.00e-73	268.00
IUUC-Tca-121765	Theobroma cacao	51.58	0.00e+00	954.00
IUUC-Tre-121887	Trichoderma reesei	34.41	1.00e-62	234.00
IUUC-Tvi-122262	Trichoderma virens	34.41	1.00e-62	234.00
IUUC-Tae-123009	Triticum aestivum	36.37	4.00e-145	508.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence