iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113827

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G305800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g029780	Sb01g029780.1	Sb01g029780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-21	75.2	330	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           vp++flCpI  e MrdP+v+++G ty+  +I+ wl+ g+  +Pvt+qpl++++l Pnl+l ++iq++ 
   Q: 330  VPSYFLCPILQEAMRDPHVAADGFTYEGDAIRGWLDGGNDASPVTGQPLAHRELAPNLALAAVIQDYT 397
           8****************************************************************985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGVKFHSSKL SPEQVKLFRR IEYEKVDKQL DGYVHQCSKM KVKCEKLVFE KEDDVAGLIE 60
LIVLHKVTKL IISGAADRQY SRKMDKPKSK TATEIMQRAD PSCKIWCVCK GQLICTRGEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTCTGCGTG TTTCTTATGC CACTTGCCAT CAGACAAGGA GCTCTTTCAA ACCTAGGCTT 60
CACGGCGAAC TCTGCGAAGA AGTTGGCGGC GATGGAGAAG GTTTTCGTCG TGCTGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_01g029780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007172	Arabidopsis thaliana	29.27	1.00e-34	139.00
IUUC-Bol-015248	Brassica oleracea	32.26	2.00e-46	178.00
IUUC-Bra-017454	Brassica rapa	32.16	3.00e-46	178.00
IUUC-Lpe-051298	Leersia perrieri	59.47	1.00e-112	399.00
IUUC-Oba-075683	Oryza barthii	57.42	1.00e-107	382.00
IUUC-Obr-076714	Oryza brachyantha	58.74	4.00e-111	394.00
IUUC-Ogl-077008	Oryza glaberrima	57.42	1.00e-107	382.00
IUUC-Ogu-078004	Oryza glumaepatula	60.05	2.00e-113	401.00
IUUC-Oin-079704	Oryza indica	60.05	1.00e-112	399.00
IUUC-Olo-080493	Oryza longistaminata	58.35	5.00e-105	373.00
IUUC-Ome-081254	Oryza meridionalis	60.44	5.00e-116	410.00
IUUC-Oni-083101	Oryza nivara	60.29	3.00e-113	400.00
IUUC-Opu-084030	Oryza punctata	58.84	3.00e-110	391.00
IUUC-Oru-084389	Oryza rufipogon	60.29	2.00e-114	404.00
IUUC-Osa-085772	Oryza sativa	60.29	2.00e-114	404.00
IUUC-Sit-110620	Setaria italica	77.75	1.00e-164	572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence