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Tag Content
UUCD2 ID IUUC-Dre-028811
UUCD1 version UUC-DaR-01338
Ensembl Protein ID ENSDARP00000041303.7
UniProt Accession Q6PFS7; ATG3_DANRE
Genbank Protein ID AAH57434.1
Protein Name Ubiquitin-like-conjugating enzyme ATG3; Autophagy-related protein 3
Genbank Nucleotide ID BC057434
Gene Name atg3; apg3l; zgc:64156
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000009350.9 ENSDART00000041304.7 ENSDARP00000041303.7
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E2/Autophagy_C 45.78 2.00e-64 243.00 IUUC-Ath-006802
E2/Autophagy_C 81.07 1.00e-150 530.00 IUUC-Hsa-046449
E2/Autophagy_C 30.99 2.00e-38 154.00 IUUC-Sce-106172
Active Site
Position(s) Description Evidence
267 Glycyl thioester intermediate {ECO:0000250}
Organism Danio rerio
Functional Description
(View)

Functional Description



     E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of atg8-like proteins (gabarap, gabarapl1, gabarapl2 or map1lc3a). The atg12-atg5 conjugate plays a role of an E3 and promotes the transfer of atg8-like proteins from atg3 to phosphatidylethanolamine (PE). This step is required for the membrane association of atg8-like proteins. The formation of the atg8-phosphatidylethanolamine conjugates is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of atg12 to itself, atg12 conjugation to atg3 playing a role in mitochondrial homeostasis but not in autophagy. atg7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with atg3 (By similarity).
E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of atg8-like proteins (gabarap, gabarapl1, gabarapl2 or map1lc3a). The atg12-atg5 conjugate plays a role of an E3 and promotes the transfer of atg8-like proteins from atg3 to phosphatidylethanolamine (PE). This step is required for the membrane association of atg8-like proteins. The formation of the atg8-phosphatidylethanolamine conjugates is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of atg12 to itself, atg12 conjugation to atg3 playing a role in mitochondrial homeostasis but not in autophagy. atg7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with atg3 (By similarity).
Protein Sequence
(Fasta)
MQNVINSVKG TALGVAEFLT PVLKESKFKE TGVITPEEFV AAGDHLVHHC PTWKWASGEE 60
AKVKPYLPND KQFLLTRNVP CYKRCKQMEY SDELEAIIEE DDGDGGWVDT FHNSGVTGVT 120
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Protein Fasta Sequence



>IUUC-Dre-028811|E2,E2/Autophagy_C|Danio rerio
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Nucleotide Sequence
(Fasta)
ATATCGCGAT ATCTGAAATG CGGAAGTGTC TGTCAGATGA TTTAGGTCAT GTGGTGTGGC 60
TCGGCTAGAC TGTCTTTAAA CAGTGTAGTT AAACTCAAGC ATATTTCATC AGAAAATCTC 120
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Nucleotide Fasta Sequence



>IUUC-Dre-028811|E2,E2/Autophagy_C|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0436--Ligase
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway

Interpro

IPR007135--Autophagy-rel_prot_3
IPR019461--Autophagy-rel_prot_3_C
IPR007134--Autophagy-rel_prot_3_N

Pfam

PF03987--Autophagy_act_C
PF10381--Autophagy_C
PF03986--Autophagy_N

Gene Ontology

GO:0000153--C:cytoplasmic ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0019777--F:Atg12 transferase activity
GO:0019776--F:Atg8 ligase activity
GO:0016874--F:ligase activity
GO:0000045--P:autophagosome assembly
GO:0043653--P:mitochondrial fragmentation involved in apoptotic process
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy
GO:0015031--P:protein transport

KEGG dre:336632
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001111 Aegilops tauschii 42.75 2.00e-50 192.00
IUUC-Aml-002081 Ailuropoda melanoleuca 79.50 5.00e-149 520.00
IUUC-Atr-002712 Amborella trichopoda 45.29 3.00e-53 201.00
IUUC-Apl-003956 Anas platyrhynchos 71.06 9.00e-115 406.00
IUUC-Aca-004578 Anolis carolinensis 79.87 3.00e-151 527.00
IUUC-Aly-005823 Arabidopsis lyrata 46.43 3.00e-68 251.00
IUUC-Ath-006802 Arabidopsis thaliana 46.75 1.00e-68 253.00
IUUC-Ago-007855 Ashbya gossypii 38.56 9.00e-24 103.00
IUUC-Acl-008147 Aspergillus clavatus 50.63 9.00e-17 81.30
IUUC-Afl-008483 Aspergillus flavus 36.26 4.00e-34 139.00
IUUC-Afu-008818 Aspergillus fumigatus 32.59 4.00e-37 148.00
IUUC-Ani-009481 Aspergillus nidulans 50.00 2.00e-17 84.00
IUUC-Ang-009800 Aspergillus niger 37.84 1.00e-20 94.00
IUUC-Aor-010150 Aspergillus oryzae 36.26 4.00e-34 139.00
IUUC-Ate-010545 Aspergillus terreus 53.95 6.00e-17 81.30
IUUC-Ame-011793 Astyanax mexicanus 93.42 2.00e-169 588.00
IUUC-Bgr-012167 Blumeria graminis 35.79 5.00e-30 125.00
IUUC-Bta-012695 Bos taurus 79.81 2.00e-150 525.00
IUUC-Bci-013972 Botrytis cinerea 51.22 7.00e-17 81.60
IUUC-Bdi-014756 Brachypodium distachyon 45.13 5.00e-62 231.00
IUUC-Bol-015091 Brassica oleracea 44.41 6.00e-63 234.00
IUUC-Bra-017220 Brassica rapa 43.77 8.00e-65 240.00
IUUC-Cel-018143 Caenorhabditis elegans 50.00 1.00e-82 299.00
IUUC-Cja-018991 Callithrix jacchus 79.87 1.00e-152 531.00
IUUC-Cfa-020070 Canis familiaris 80.19 2.00e-148 518.00
IUUC-Cpo-021860 Cavia porcellus 80.76 4.00e-152 530.00
IUUC-Cre-022948 Chlamydomonas reinhardtii 40.76 1.00e-64 239.00
IUUC-Csa-023881 Chlorocebus sabaeus 81.07 3.00e-152 530.00
IUUC-Cho-024852 Choloepus hoffmanni 76.03 1.00e-140 492.00
IUUC-Cin-025787 Ciona intestinalis 66.25 5.00e-113 400.00
IUUC-Csv-026369 Ciona savignyi 64.26 9.00e-109 386.00
IUUC-Cgl-026680 Colletotrichum gloeosporioides 35.03 5.00e-19 88.60
IUUC-Cne-026905 Cryptococcus neoformans 35.31 3.00e-48 185.00
IUUC-Dno-030081 Dasypus novemcinctus 79.56 8.00e-148 516.00
IUUC-Dor-030183 Dipodomys ordii 83.97 5.00e-66 244.00
IUUC-Dse-031539 Dothistroma septosporum 42.39 4.00e-11 62.40
IUUC-Dme-031805 Drosophila melanogaster 60.00 4.00e-105 374.00
IUUC-Ete-033171 Echinops telfairi 82.33 1.00e-147 515.00
IUUC-Eca-034083 Equus caballus 79.81 2.00e-150 524.00
IUUC-Eeu-034804 Erinaceus europaeus 81.39 4.00e-145 507.00
IUUC-Fca-036289 Felis catus 80.13 7.00e-151 526.00
IUUC-Fal-037060 Ficedula albicollis 84.54 3.00e-150 524.00
IUUC-Fox-038051 Fusarium oxysporum 30.49 5.00e-33 135.00
IUUC-Fso-038124 Fusarium solani 49.38 1.00e-18 87.40
IUUC-Gmo-039538 Gadus morhua 84.38 9.00e-158 549.00
IUUC-Ggr-039880 Gaeumannomyces graminis 34.55 3.00e-20 92.80
IUUC-Gga-041108 Gallus gallus 84.23 3.00e-148 517.00
IUUC-Gac-041558 Gasterosteus aculeatus 87.11 9.00e-163 565.00
IUUC-Gma-043969 Glycine max 44.63 4.00e-65 241.00
IUUC-Ggo-045071 Gorilla gorilla 81.07 9.00e-152 529.00
IUUC-Hsa-046449 Homo sapiens 81.07 9.00e-152 529.00
IUUC-Hvu-047451 Hordeum vulgare 46.30 3.00e-62 231.00
IUUC-Itr-048360 Ictidomys tridecemlineatus 80.13 2.00e-150 524.00
IUUC-Kpa-049096 Komagataella pastoris 35.21 9.00e-45 173.00
IUUC-Lch-049726 Latimeria chalumnae 82.02 9.00e-157 545.00
IUUC-Lpe-050734 Leersia perrieri 45.20 6.00e-55 207.00
IUUC-Loc-051983 Lepisosteus oculatus 89.59 3.00e-160 557.00
IUUC-Lma-053038 Leptosphaeria maculans 35.98 1.00e-29 124.00
IUUC-Laf-054510 Loxodonta africana 79.25 6.00e-139 486.00
IUUC-Mcc-054792 Macaca mulatta 81.07 3.00e-152 530.00
IUUC-Meu-055965 Macropus eugenii 69.09 1.00e-120 426.00
IUUC-Mor-057292 Magnaporthe oryzae 31.62 3.00e-35 142.00
IUUC-Mtr-058282 Medicago truncatula 44.98 4.00e-67 248.00
IUUC-Mla-059144 Melampsora laricipopulina 39.80 5.00e-50 191.00
IUUC-Mga-059509 Meleagris gallopavo 83.60 2.00e-148 518.00
IUUC-Mvi-060281 Microbotryum violaceum 51.92 1.00e-25 110.00
IUUC-Mmr-061788 Microcebus murinus 82.33 6.00e-150 523.00
IUUC-Mdo-062922 Monodelphis domestica 80.13 4.00e-150 523.00
IUUC-Mmu-064249 Mus musculus 80.76 3.00e-152 531.00
IUUC-Mac-064843 Musa acuminata 44.75 3.00e-65 241.00
IUUC-Mpu-065717 Mustela putorius furo 82.65 1.00e-149 522.00
IUUC-Mlu-067151 Myotis lucifugus 76.41 7.00e-135 473.00
IUUC-Nfi-068551 Neosartorya fischeri 36.98 8.00e-35 140.00
IUUC-Ncr-068846 Neurospora crassa 35.97 2.00e-35 143.00
IUUC-Nle-069790 Nomascus leucogenys 81.07 9.00e-152 529.00
IUUC-Ont-072517 Oreochromis niloticus 88.64 7.00e-157 546.00
IUUC-Oan-073285 Ornithorhynchus anatinus 82.33 1.00e-97 349.00
IUUC-Ocu-074695 Oryctolagus cuniculus 80.76 6.00e-152 530.00
IUUC-Oba-075515 Oryza barthii 46.15 2.00e-66 246.00
IUUC-Obr-076787 Oryza brachyantha 46.75 6.00e-66 244.00
IUUC-Ogl-077440 Oryza glaberrima 45.99 1.00e-66 246.00
IUUC-Ogu-078294 Oryza glumaepatula 46.15 2.00e-66 246.00
IUUC-Oin-079452 Oryza indica 47.08 2.00e-67 248.00
IUUC-Olo-080450 Oryza longistaminata 45.08 5.00e-65 241.00
IUUC-Ome-081514 Oryza meridionalis 46.93 2.00e-66 245.00
IUUC-Oni-082677 Oryza nivara 47.08 2.00e-67 248.00
IUUC-Opu-083925 Oryza punctata 46.47 1.00e-66 246.00
IUUC-Oru-084828 Oryza rufipogon 46.23 2.00e-65 243.00
IUUC-Osa-085937 Oryza sativa 47.08 2.00e-67 248.00
IUUC-Ola-086559 Oryzias latipes 85.65 2.00e-99 354.00
IUUC-Olu-087766 Ostreococcus lucimarinus 36.31 5.00e-51 194.00
IUUC-Oga-087983 Otolemur garnettii 79.56 1.00e-148 519.00
IUUC-Oar-089281 Ovis aries 79.50 2.00e-150 525.00
IUUC-Ptr-090983 Pan troglodytes 81.07 9.00e-152 529.00
IUUC-Pan-092457 Papio anubis 80.76 1.00e-151 529.00
IUUC-Psi-094046 Pelodiscus sinensis 81.23 1.00e-140 492.00
IUUC-Pno-094925 Phaeosphaeria nodorum 34.73 1.00e-31 130.00
IUUC-Ppa-095487 Physcomitrella patens 46.58 4.00e-65 241.00
IUUC-Pfo-096968 Poecilia formosa 87.07 3.00e-160 557.00
IUUC-Pab-098621 Pongo abelii 80.76 3.00e-149 521.00
IUUC-Pop-100007 Populus trichocarpa 46.43 5.00e-68 251.00
IUUC-Pca-100590 Procavia capensis 63.72 3.00e-112 398.00
IUUC-Ppe-101657 Prunus persica 44.95 3.00e-65 241.00
IUUC-Pva-102446 Pteropus vampyrus 80.13 1.00e-150 525.00
IUUC-Pgr-103604 Puccinia graminis 59.76 1.00e-25 110.00
IUUC-Ptt-103941 Puccinia triticina 59.76 1.00e-25 110.00
IUUC-Pte-104252 Pyrenophora teres 36.60 3.00e-32 132.00
IUUC-Pyt-104556 Pyrenophora triticirepentis 36.50 8.00e-31 127.00
IUUC-Rno-106025 Rattus norvegicus 79.81 1.00e-150 525.00
IUUC-Sce-106172 Saccharomyces cerevisiae 32.04 7.00e-38 150.00
IUUC-Sha-106858 Sarcophilus harrisii 80.76 8.00e-150 522.00
IUUC-Sja-107905 Schizosaccharomyces japonicus 33.67 5.00e-41 161.00
IUUC-Spo-108185 Schizosaccharomyces pombe 44.00 1.00e-18 87.00
IUUC-Smo-108883 Selaginella moellendorffii 43.77 2.00e-55 209.00
IUUC-Sit-110512 Setaria italica 44.34 7.00e-63 234.00
IUUC-Sly-111238 Solanum lycopersicum 47.17 2.00e-69 256.00
IUUC-Stu-112441 Solanum tuberosum 47.17 3.00e-69 255.00
IUUC-Sar-113039 Sorex araneus 67.03 1.00e-103 369.00
IUUC-Sbi-113776 Sorghum bicolor 47.19 1.00e-62 233.00
IUUC-Sre-115074 Sporisorium reilianum 51.76 1.00e-22 101.00
IUUC-Ssc-115262 Sus scrofa 79.81 6.00e-150 523.00
IUUC-Tgu-116790 Taeniopygia guttata 84.23 8.00e-150 523.00
IUUC-Tru-118160 Takifugu rubripes 84.23 6.00e-152 530.00
IUUC-Tsy-119145 Tarsius syrichta 63.72 1.00e-109 389.00
IUUC-Tni-119937 Tetraodon nigroviridis 79.25 1.00e-146 512.00
IUUC-Tca-121323 Theobroma cacao 44.84 1.00e-62 233.00
IUUC-Tre-121993 Trichoderma reesei 47.47 9.00e-19 87.80
IUUC-Tvi-122332 Trichoderma virens 45.45 1.00e-18 87.40
IUUC-Tae-124391 Triticum aestivum 45.02 5.00e-62 231.00
IUUC-Tur-126679 Triticum urartu 44.48 2.00e-61 229.00
IUUC-Tme-127159 Tuber melanosporum 38.10 2.00e-12 66.20
IUUC-Ttr-128261 Tursiops truncatus 79.52 2.00e-138 484.00
IUUC-Uma-129572 Ustilago maydis 34.52 1.00e-43 171.00
IUUC-Vda-129966 Verticillium dahliae 32.67 1.00e-37 150.00
IUUC-Vpa-130698 Vicugna pacos 74.13 2.00e-134 472.00
IUUC-Xtr-132878 Xenopus tropicalis 80.62 7.00e-150 523.00
IUUC-Xma-134017 Xiphophorus maculatus 86.44 3.00e-159 554.00
IUUC-Yli-134373 Yarrowia lipolytica 47.92 2.00e-20 93.20
IUUC-Zma-135222 Zea mays 44.10 5.00e-63 234.00
Created Date 25-Jun-2017

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