iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095862

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544930

Gene Name

PHYPADRAFT_162248

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S41_55V6	PP1S41_55V6.1	PP1S41_55V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.1	32	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkw..pglknssskefr....CPlCr 46
           C+iC+e +    + + l+ pCgH+f+a+C+ +    + k+s ++  +    CP+Cr
   Q: 32   CPICFELMkspdFSPILLSPCGHTFCAKCVSRHvsIHEKQSRYGGPLqpapCPYCR 87
           ******99444444477899*********9555474444444444425555****8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDRYSLFSMW PHASTMSTIT SSIADQIESN TCPICFELMK SPDFSPILLS PCGHTFCAKC 60
VSRHVSIHEK QSRYGGPLQP APCPYCRQNI SSQTLNISLQ KMITSILSLQ ETLEKADADT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCATAACT ATGTGTCCGA CCAGATAGTT GGGTACTGAG GTGAACCTGT TAAGATCATG 60
GACGTCATCC ACTTAAGCAA ATTATGTCTG ATGTAACGGT TTGAGTGCCT GAAGTTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_162248

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003984	Anas platyrhynchos	34.02	6.00e-06	42.40
IUUC-Ame-010800	Astyanax mexicanus	38.33	5.00e-07	48.50
IUUC-Cin-025118	Ciona intestinalis	33.33	5.00e-07	48.90
IUUC-Csv-026320	Ciona savignyi	34.15	1.00e-06	47.80
IUUC-Dre-027597	Danio rerio	33.68	1.00e-08	53.90
IUUC-Eca-033931	Equus caballus	36.99	2.00e-06	46.20
IUUC-Fal-037412	Ficedula albicollis	34.72	6.00e-08	51.60
IUUC-Ggo-044635	Gorilla gorilla	37.33	5.00e-06	45.10
IUUC-Hsa-046345	Homo sapiens	37.33	5.00e-06	45.10
IUUC-Loc-052349	Lepisosteus oculatus	30.23	7.00e-08	51.60
IUUC-Mga-059764	Meleagris gallopavo	35.00	1.00e-06	48.10
IUUC-Nle-069310	Nomascus leucogenys	37.33	5.00e-06	45.10
IUUC-Obr-076345	Oryza brachyantha	27.41	1.00e-06	47.00
IUUC-Opu-083277	Oryza punctata	25.19	2.00e-06	46.60
IUUC-Osa-086171	Oryza sativa	30.77	2.00e-05	42.70
IUUC-Ptr-090518	Pan troglodytes	37.33	5.00e-06	44.70
IUUC-Psi-093209	Pelodiscus sinensis	34.04	6.00e-07	48.10
IUUC-Pfo-096898	Poecilia formosa	32.29	1.00e-07	50.40
IUUC-Pca-100154	Procavia capensis	35.00	8.00e-06	45.10
IUUC-Pte-104339	Pyrenophora teres	25.77	5.00e-06	46.20
IUUC-Sha-107384	Sarcophilus harrisii	40.74	1.00e-04	40.80
IUUC-Smo-109293	Selaginella moellendorffii	40.64	6.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence