iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002973

Ensembl Protein ID

ERM97055

UniProt Accession

W1NPR1; W1NPR1_AMBTC

Genbank Protein ID

ERM97055.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI396610

Gene Name

AMTR_s00122p00094620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00122p00094620	ERM97055	ERM97055

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-19	68.6	650	679

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  +t+++f ++ ++l+++s D+t++vWD
   Q: 650  HSLLITDVRFsPSmPRLATSSFDKTVRVWD 679
           77789******777**************** PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYL VKRNLQASAK AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSDVAASYIE TQLIKAREQQ QQSQQQPQQQ QQQLHMQQLL LQRQAQQQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCTGATAAA ATGTGGGATT TTGGCTTCAA AACCATGTTT 60
TCTTTTTGTT TTGTTCTATT ATTTGGTTTA TGCTTGCTAT TTGTATTGTA GGGTTTGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

KEGG

atr:18424981

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006446	Arabidopsis lyrata	68.58	0.00e+00	857.00
IUUC-Ath-006594	Arabidopsis thaliana	64.31	0.00e+00	835.00
IUUC-Bol-015720	Brassica oleracea	69.39	0.00e+00	811.00
IUUC-Bra-017088	Brassica rapa	68.72	0.00e+00	814.00
IUUC-Hvu-047773	Hordeum vulgare	68.03	1.00e-132	465.00
IUUC-Lpe-051536	Leersia perrieri	62.68	0.00e+00	743.00
IUUC-Mtr-058634	Medicago truncatula	70.68	0.00e+00	835.00
IUUC-Mac-065234	Musa acuminata	66.59	0.00e+00	944.00
IUUC-Oba-075419	Oryza barthii	62.41	0.00e+00	690.00
IUUC-Obr-076118	Oryza brachyantha	60.43	0.00e+00	715.00
IUUC-Ogl-077064	Oryza glaberrima	62.73	0.00e+00	743.00
IUUC-Ogu-078816	Oryza glumaepatula	62.71	0.00e+00	671.00
IUUC-Oin-079642	Oryza indica	60.51	0.00e+00	704.00
IUUC-Olo-080338	Oryza longistaminata	58.92	2.00e-175	607.00
IUUC-Ome-081901	Oryza meridionalis	59.94	0.00e+00	682.00
IUUC-Oni-082753	Oryza nivara	61.96	0.00e+00	688.00
IUUC-Opu-083283	Oryza punctata	64.16	0.00e+00	808.00
IUUC-Oru-084538	Oryza rufipogon	62.26	0.00e+00	684.00
IUUC-Osa-086142	Oryza sativa	63.02	0.00e+00	746.00
IUUC-Pop-098994	Populus trichocarpa	73.82	0.00e+00	877.00
IUUC-Ppe-102018	Prunus persica	69.51	0.00e+00	867.00
IUUC-Smo-108724	Selaginella moellendorffii	57.52	0.00e+00	698.00
IUUC-Sit-109866	Setaria italica	64.46	0.00e+00	739.00
IUUC-Sly-110921	Solanum lycopersicum	72.69	0.00e+00	869.00
IUUC-Sbi-113848	Sorghum bicolor	62.20	0.00e+00	723.00
IUUC-Tca-121720	Theobroma cacao	72.04	0.00e+00	865.00
IUUC-Tur-126743	Triticum urartu	55.10	0.00e+00	631.00
IUUC-Vvi-131473	Vitis vinifera	72.12	0.00e+00	897.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence