iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014657

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881

Gene Name

LOC100831127; BRADI_2g04820

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G04820	BRADI2G04820.1	BRADI2G04820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-25	87.2	641	672
UBD/Beta-Prp	1.00e-46	160.1	590	730

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H+  +t+++f ++ ++++++s D+t++vWD++
   Q: 641  HSHLITDVRFsPSvPRVATSSFDKTVRVWDVD 672
           9999*******889****************86 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltg 177
           +  +++ ++ +++v++++fs +g+ l++G+hd+ + +w+ et +  + +l++h+++++ v+++p+   ++++s D+tvr+Wd+ ++g  +rt+tg
   Q: 590  FREISSARASTNKVVCCHFSSDGKLLATGGHDKKAVLWHAETLKQNS-ILEEHSHLITDVRFSPSVPRVATSSFDKTVRVWDVdNQGYSIRTFTG 683
           556777889999********************************999.****************99*****************88999******9 PP
   S: 178  ghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdn 224
            h +sv s++f++n+   + s++ d+ +++w++ +g++v++++g +++
   Q: 684  -HSGSVMSVDFHPNKdDLICSCDGDSEIRFWSINNGSIVQIFKGGSSQ 730
           .*************9556679*********************998765 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAQDTWEADK SLDAYIYDYL VKRNLQNTAK AFLAEGNVST DPVAIDAPGG FLFEWWSVFW 60
EIFIARTNGK HSEDAASYIE TQKIKAQEQQ ALRQQQHQLA HSQQSPHQIQ TQQVLLQRHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCTCCC CTCTTCCCCT TATTAAATCA TCAGGCACCT ACTTTCTCTC CTCTCGTATA 60
GAGTTCTTTT TAAAGAATCA ACTTGCGTTT CGGCCCGCAA AGTGGACTCC TGATTGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047499	Hordeum vulgare	81.74	0.00e+00	664.00
IUUC-Lpe-051564	Leersia perrieri	65.33	0.00e+00	788.00
IUUC-Mtr-058613	Medicago truncatula	58.76	0.00e+00	702.00
IUUC-Oba-075419	Oryza barthii	73.84	0.00e+00	907.00
IUUC-Obr-076118	Oryza brachyantha	76.46	0.00e+00	939.00
IUUC-Ogl-077064	Oryza glaberrima	76.98	0.00e+00	974.00
IUUC-Ogu-078816	Oryza glumaepatula	73.16	0.00e+00	885.00
IUUC-Oin-079222	Oryza indica	73.30	0.00e+00	888.00
IUUC-Ome-081375	Oryza meridionalis	73.30	0.00e+00	884.00
IUUC-Oni-082753	Oryza nivara	73.71	0.00e+00	909.00
IUUC-Opu-083283	Oryza punctata	73.43	0.00e+00	887.00
IUUC-Oru-084538	Oryza rufipogon	74.11	0.00e+00	909.00
IUUC-Osa-086142	Oryza sativa	77.25	0.00e+00	977.00
IUUC-Sit-110603	Setaria italica	68.52	0.00e+00	843.00
IUUC-Tae-125242	Triticum aestivum	80.95	0.00e+00	996.00
IUUC-Tur-126626	Triticum urartu	84.13	0.00e+00	652.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence