iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042693

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843

Gene Name

LOC100786818; GLYMA_10G200300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G34390	GLYMA10G34390.1	GLYMA10G34390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-08	35.9	279	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v++laf s+  l+++++ D++ik+WDlr++ +l++
   Q: 279  HHGPVSALAFhSNgLLMATAGKDKKIKLWDLRKFEVLQT 317
           8899*******775888****************999875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGEIKENVPL PKTKPSTEQD VTDELDLRMK KYLRGEGANL EGLKDKKLKG QLAAKEDLYG 60
KSAKAAAKAE KWLMPSEGGY LEAEGLEKTW RIKQEAIAHE VDISSSRKQY DIILPELGPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGTATACA CATGCGAGCA GCGAGGTCAA AATCGTTTAA AACCCTTAAA CCCTGCGACG 60
CCGTTTCTCG TCATCTCTCT CTCCGGTGCT CCGTTGTCCG ACGAGACCGA AGCCGTGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

gmx:100786818

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	63.08	0.00e+00	632.00
IUUC-Atr-002528	Amborella trichopoda	69.19	2.00e-178	618.00
IUUC-Aly-005663	Arabidopsis lyrata	70.22	0.00e+00	695.00
IUUC-Ath-007405	Arabidopsis thaliana	69.10	0.00e+00	685.00
IUUC-Ang-009764	Aspergillus niger	37.89	2.00e-93	336.00
IUUC-Bdi-014915	Brachypodium distachyon	62.98	1.00e-177	615.00
IUUC-Bol-015965	Brassica oleracea	68.48	0.00e+00	669.00
IUUC-Bra-016837	Brassica rapa	68.35	0.00e+00	647.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	46.58	4.00e-132	464.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	39.26	1.00e-100	360.00
IUUC-Dse-031280	Dothistroma septosporum	37.57	4.00e-92	332.00
IUUC-Fox-037980	Fusarium oxysporum	38.38	1.00e-92	333.00
IUUC-Lpe-051501	Leersia perrieri	63.32	4.00e-172	601.00
IUUC-Meu-056419	Macropus eugenii	43.98	4.00e-80	292.00
IUUC-Mor-057146	Magnaporthe oryzae	38.61	6.00e-91	328.00
IUUC-Mpo-057512	Magnaporthe poae	38.99	3.00e-98	352.00
IUUC-Mac-065643	Musa acuminata	68.71	0.00e+00	688.00
IUUC-Oba-075525	Oryza barthii	62.62	0.00e+00	630.00
IUUC-Obr-076468	Oryza brachyantha	62.69	0.00e+00	635.00
IUUC-Ogl-077395	Oryza glaberrima	62.62	0.00e+00	630.00
IUUC-Ogu-078730	Oryza glumaepatula	62.43	0.00e+00	630.00
IUUC-Oin-079797	Oryza indica	62.62	0.00e+00	632.00
IUUC-Olo-080539	Oryza longistaminata	62.19	5.00e-180	624.00
IUUC-Oni-082635	Oryza nivara	62.43	0.00e+00	629.00
IUUC-Opu-083733	Oryza punctata	62.76	0.00e+00	639.00
IUUC-Oru-084560	Oryza rufipogon	62.62	0.00e+00	632.00
IUUC-Osa-085463	Oryza sativa	62.43	0.00e+00	630.00
IUUC-Olu-087881	Ostreococcus lucimarinus	42.32	6.00e-108	384.00
IUUC-Ppa-095230	Physcomitrella patens	49.90	1.00e-136	479.00
IUUC-Ppe-101354	Prunus persica	79.03	0.00e+00	718.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	39.66	1.00e-99	357.00
IUUC-Spo-108359	Schizosaccharomyces pombe	41.56	5.00e-96	344.00
IUUC-Tvi-122437	Trichoderma virens	42.69	9.00e-97	347.00
IUUC-Tae-125874	Triticum aestivum	63.08	0.00e+00	632.00
IUUC-Tur-126078	Triticum urartu	62.50	6.00e-171	593.00
IUUC-Ttr-129047	Tursiops truncatus	44.27	1.00e-90	327.00
IUUC-Zma-135903	Zea mays	64.11	8.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence