iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120973

Ensembl Protein ID

EOY03388

UniProt Accession

A0A061EFG6; A0A061EFG6_THECC

Genbank Protein ID

EOY03388.1

Protein Name

F-box family protein

Genbank Nucleotide ID

CM001882

Gene Name

TCM_018392

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_018392	EOY03388	EOY03388

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-17	64.2	248	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           gH+ +vt+++     + llv+ s D +++vWD++t  
   Q: 248  GHQKPVTSMSVaghRTSLLVTMSKDSKVRVWDTTTSS 284
           8*******9888775489**************99876 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAAPPASPQQ AATKITDLDE DSLAHCAAYL SLQDLSNLAI TSKFLKKVAY SDSIWLHRFR 60
ERWPLEMLSS SSLGVRKAYL DCRTALHQLK FADPFVLDLY TEASHFDHIL LDKNDIIFSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTACAATTA TTTTTCATTC CAAGCATTGT ATCAATAATA CATAAATCTC TCATTTCTTC 60
GGGTTTCCAT CAATTCTTTT ACAACAACTT GGAGGAAACG TTTCTTGTTT AATGTTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	50.21	1.00e-121	429.00
IUUC-Bdi-014621	Brachypodium distachyon	45.18	1.00e-109	389.00
IUUC-Gma-043867	Glycine max	60.04	4.00e-170	590.00
IUUC-Hvu-047817	Hordeum vulgare	43.78	3.00e-113	400.00
IUUC-Lpe-051161	Leersia perrieri	45.18	3.00e-109	387.00
IUUC-Mtr-057899	Medicago truncatula	61.21	3.00e-116	410.00
IUUC-Mac-065373	Musa acuminata	55.14	3.00e-109	388.00
IUUC-Oba-075705	Oryza barthii	45.23	2.00e-114	404.00
IUUC-Obr-076913	Oryza brachyantha	45.90	4.00e-113	400.00
IUUC-Ogl-077871	Oryza glaberrima	45.44	1.00e-114	406.00
IUUC-Ogu-078128	Oryza glumaepatula	45.44	6.00e-115	407.00
IUUC-Oin-079947	Oryza indica	45.44	9.00e-115	406.00
IUUC-Olo-080246	Oryza longistaminata	45.43	7.00e-90	323.00
IUUC-Ome-081308	Oryza meridionalis	45.34	3.00e-115	407.00
IUUC-Oni-082542	Oryza nivara	45.44	6.00e-115	407.00
IUUC-Opu-083600	Oryza punctata	45.84	3.00e-114	404.00
IUUC-Oru-084880	Oryza rufipogon	45.23	1.00e-114	405.00
IUUC-Osa-085335	Oryza sativa	48.18	3.00e-93	334.00
IUUC-Ppa-095334	Physcomitrella patens	43.06	2.00e-97	349.00
IUUC-Pop-099428	Populus trichocarpa	74.25	9.00e-151	525.00
IUUC-Ppe-101795	Prunus persica	67.11	8.00e-147	512.00
IUUC-Smo-108689	Selaginella moellendorffii	37.72	3.00e-66	245.00
IUUC-Sit-110574	Setaria italica	45.95	2.00e-107	382.00
IUUC-Sly-111776	Solanum lycopersicum	52.23	2.00e-139	488.00
IUUC-Stu-112081	Solanum tuberosum	56.94	8.00e-88	315.00
IUUC-Sbi-114123	Sorghum bicolor	43.67	5.00e-112	397.00
IUUC-Tae-123831	Triticum aestivum	44.61	6.00e-114	403.00
IUUC-Vvi-131356	Vitis vinifera	69.18	0.00e+00	678.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence