iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099894

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_566707; POPTR_0010s14330g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s14330	POPTR_0010s14330.1	POPTR_0010s14330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-09	38.6	53	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d    ++ + l+CgH+fh+ Cl++w     +  ++ +CPlCr
   Q: 53   CAVCLSDVqeGEEIRELRCGHIFHRACLYRW-----LDFRQSTCPLCR 95
           ********66333999***************.....7889999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MFIKYLNLIS AHLRWAFNFL CYYPFSFQEH ELFAVTAIGE ELNTVINEAP AECAVCLSDV 60
QEGEEIRELR CGHIFHRACL YRWLDFRQST CPLCRGSLAP RRTLILDQHR TEVLTFKFCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCTATAAA GGTCACCCAT TGCCCCCATC TATTTTGATA CAGAACCATT TCCTCCTTGT 60
TCATCTCTCC CAACTCCTTT TCTAGCTCAT TTTTGTTTTT GCGACAAAAT TAACCTCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s14330g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001171	Aegilops tauschii	57.45	2.00e-11	62.80
IUUC-Mac-064970	Musa acuminata	70.59	1.00e-17	81.30
IUUC-Oba-075029	Oryza barthii	67.39	6.00e-13	66.20
IUUC-Obr-076270	Oryza brachyantha	62.50	3.00e-13	67.00
IUUC-Ogl-077400	Oryza glaberrima	56.82	2.00e-10	58.20
IUUC-Ome-081389	Oryza meridionalis	56.82	2.00e-10	58.50
IUUC-Oni-082289	Oryza nivara	56.82	2.00e-10	58.50
IUUC-Opu-083744	Oryza punctata	40.00	2.00e-10	58.20
IUUC-Ppe-101612	Prunus persica	42.28	2.00e-27	114.00
IUUC-Ssl-108451	Sclerotinia sclerotiorum	40.98	6.00e-11	61.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence