iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108721

Ensembl Protein ID

EFJ14432

UniProt Accession

D8SM57; D8SM57_SELML

Genbank Protein ID

EFJ14432.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377627

Gene Name

SELMODRAFT_234532

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_234532	EFJ14432	EFJ14432

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-14	54.5	251	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H+++v+ +++  s+ +l+s+s Dgt+++W 
   Q: 251  HSAEVWQIDWdmSGMTLASSSSDGTVRLWQ 280
           99********8877669************5 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAMAELDSGA AVTSWNYSGE RMAVGFTDGG AEVSSSIVKL CWGPMEFGDI VASCSTDGSV 60
CVWEEINENG KPKWRQCAQL AENSYCLDLK FGNCLGGLKL VTACADGYAR IYETSDCIDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATGG CGGAGCTCGA TTCTGGCGCT GCCGTTACGT CCTGGAACTA CAGCGGTGAA 60
AGAATGGCTG TGGGGTTCAC CGATGGCGGC GCCGAGGTGT GGAGCAAGGG ATTTGGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_234532

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	45.59	4.00e-51	193.00
IUUC-Bdi-014594	Brachypodium distachyon	43.09	2.00e-69	254.00
IUUC-Mtr-057876	Medicago truncatula	38.94	4.00e-63	234.00
IUUC-Mla-058820	Melampsora laricipopulina	25.61	3.00e-11	61.60
IUUC-Mac-064960	Musa acuminata	42.37	4.00e-67	247.00
IUUC-Oba-075325	Oryza barthii	39.42	6.00e-62	230.00
IUUC-Obr-076089	Oryza brachyantha	41.53	2.00e-67	248.00
IUUC-Ogl-077279	Oryza glaberrima	41.85	6.00e-69	253.00
IUUC-Ogu-078901	Oryza glumaepatula	39.42	8.00e-62	229.00
IUUC-Oin-079385	Oryza indica	38.99	3.00e-66	244.00
IUUC-Ome-081809	Oryza meridionalis	43.94	3.00e-64	239.00
IUUC-Opu-083324	Oryza punctata	41.16	5.00e-64	236.00
IUUC-Oru-084801	Oryza rufipogon	41.85	4.00e-69	253.00
IUUC-Osa-085790	Oryza sativa	41.85	6.00e-69	253.00
IUUC-Olu-087855	Ostreococcus lucimarinus	25.63	1.00e-17	82.80
IUUC-Tur-126582	Triticum urartu	42.18	5.00e-61	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence