iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109479

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377654

Gene Name

SELMODRAFT_159611

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_159611	EFJ10440	EFJ10440

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-33	111.9	159	194
UBD/Beta-Prp	1.80e-44	152.8	16	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           H d v+++++  s+ ++l+sG+ Dg i++WD+r+  
   Q: 159  HRDAVWAVKWsaSSeWILISGGCDGAIRLWDIRRAG 194
           9***********556****************98765 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseD.rtikvwdls...........tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsgh 136
           s+  ++v++++++p +  ++ +++  + i v+d+s               +++ k+h +sv s++++p ++  ++sGs d+ i+vwd +t ++l +++ + 
   Q: 16   SSGRGAVNSLQIDPVEARYMLAGNGnGSISVYDISqpttvepysqkHEALFSIDKAHRYSVSSVRWYPvDTGIFISGSFDKHINVWDANTLEVLMQFKMPG 116
           66777888888888877444444444888888888666666666644444444448888888888888777888888888888888888888887666666 PP
   S: 137  dgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnght............. 222
           + +  +++  +++  l+++G+ D  +rl d+++g   +tl+  h d+v  ++++ ++   l+sg++dg ++lwd+++  c + l  h+             
   Q: 117  KVFGVSMSPVSTThMLIATGTEDYRIRLCDISSGAFTHTLSA-HRDAVWAVKWSASSeWILISGGCDGAIRLWDIRRAGCFYVLDQHRssasqegnsfplv 216
           655555555555567888888888888888888888888876.8888888888777745677888888888888888778555555555555555555555 PP
   S: 223  ...........................................dnvksvrfspnderlvsgssDgsiriWdlrs 253
                                                       +v+s+++s+++++l+s++sD  +++Wd++ 
   Q: 217  lfcfvyffeateisraaktskdatpgrvhpgltsaldrstahyGTVTSLQTSRDGHYLLSAGSDSRVKLWDIER 290
           5555555555555555555555556666666666666665555****************************986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MRSRALELCK TKDVISSGRG AVNSLQIDPV EARYMLAGNG NGSISVYDIS QPTTVEPYSQ 60
KHEALFSIDK AHRYSVSSVR WYPVDTGIFI SGSFDKHINV WDANTLEVLM QFKMPGKVFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAGAGCGCG AGCTCGGGGC ACCGCCATGG CGCTACGCTG CTTCTGTTCG CCGGATGAGA 60
TCTCGCGCAT TGGAGCTGTG CAAGACCAAG GATGTGATTT CGTCTGGCAG AGGCGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_159611

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014899	Brachypodium distachyon	47.84	4.00e-116	411.00
IUUC-Gma-043004	Glycine max	49.88	1.00e-116	412.00
IUUC-Hvu-047678	Hordeum vulgare	51.27	4.00e-82	297.00
IUUC-Oba-075759	Oryza barthii	50.12	2.00e-112	398.00
IUUC-Ogl-077924	Oryza glaberrima	54.68	5.00e-37	146.00
IUUC-Ogu-078186	Oryza glumaepatula	47.88	3.00e-106	377.00
IUUC-Olo-080916	Oryza longistaminata	60.32	2.00e-22	98.20
IUUC-Ome-081471	Oryza meridionalis	48.51	2.00e-81	295.00
IUUC-Oni-082449	Oryza nivara	50.51	2.00e-105	375.00
IUUC-Opu-083210	Oryza punctata	50.36	8.00e-114	402.00
IUUC-Oru-085159	Oryza rufipogon	50.12	1.00e-112	399.00
IUUC-Osa-085926	Oryza sativa	50.65	1.00e-46	178.00
IUUC-Olu-087853	Ostreococcus lucimarinus	32.44	6.00e-57	213.00
IUUC-Pan-092303	Papio anubis	40.98	7.00e-19	85.10
IUUC-Sit-110300	Setaria italica	50.59	5.00e-114	403.00
IUUC-Sbi-113790	Sorghum bicolor	50.83	4.00e-114	404.00
IUUC-Tae-125730	Triticum aestivum	47.86	6.00e-110	390.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence