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Tag Content
iUUCD ID IUUC-Aly-006009
Ensembl Protein ID fgenesh2_kg.6__1342__AT5G13840.1
UniProt Accession D7M5X1; D7M5X1_ARALL
Genbank Protein ID EFH49889.1
Protein Name WD-40 repeat family protein
Genbank Nucleotide ID GL348718
Gene Name FZR3; ARALYDRAFT_488208
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__1342__AT5G13840.1 fgenesh2_kg.6__1342__AT5G13840.1 fgenesh2_kg.6__1342__AT5G13840.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.00e-23 81.2 296 330
E3 adaptor/Cullin RING/APC_C/CDC20 1.70e-140 468.2 162 462
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
    gH+++v++l++ +d + l+sG++D+++ vW+ +++
   Q: 296 GHKSEVCGLKWsHDdRELASGGNDNQLLVWNNHSQ 330
    8***********55599**************8776 PP
   


   E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkge 77
    p+kvldap+l+ddfyln++dWss+nvlav+Lg++vylw a++++vskl+dl ++d+v+sv+w++eg+++++Gt++g+
   Q: 162 PHKVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVSKLCDLGPNDSVCSVQWTREGSYISIGTSHGQ 238
    689************************************************************************** PP
   S: 78 veiyDveekkkvrtltghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLas 154
    v+++D ++k+vrt+ gh++r g L+Wn+ +lssGsrd++il++d+rv+ +s+l +h++evCGlkw++d+++Las
   Q: 239 VQVWDGIQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKSEVCGLKWSHDDRELAS 315
    ***************************************************************************** PP
   S: 155 GGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllw 231
    GGnDn++ vw+++s++P+ k +eh+aavkai+wsP+q+slLasGGGtaDrci+fwnt++g++l++idtgsqvc+l+w
   Q: 316 GGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGHQLNSIDTGSQVCNLAW 392
    ***************************************************************************** PP
   S: 232 skkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdkkk 301
    sk+ +e+vsthG+++n+i+lwkyps+skva+l+gh++Rvl+la spdg++ivt+agDetlrfw++f + k
   Q: 393 SKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
    ******************************************************************7655 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA 60
FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPCLSP AGRQGSASSP MSPCTNMLRF 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006009|E3,WD_repeat;E3,CDC20|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTAGGACCA AAGATCTGAC CGTTGGAGCA TGAACTCCAC AAATCCGATG AGACATGGTT 60
TCTTTCATAA ATGTACATAT TTTAATCAGA TCCCGCTCCT ATATACTATT ATATAATCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006009|E3,WD_repeat;E3,CDC20|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG aly:ARALYDRAFT_488208
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-003035 Amborella trichopoda 70.15 0.00e+00 634.00
IUUC-Ath-007167 Arabidopsis thaliana 98.54 0.00e+00 822.00
IUUC-Bdi-015033 Brachypodium distachyon 64.50 2.00e-176 611.00
IUUC-Bol-016159 Brassica oleracea 95.05 0.00e+00 817.00
IUUC-Bra-017745 Brassica rapa 94.03 0.00e+00 813.00
IUUC-Gma-043563 Glycine max 75.97 0.00e+00 695.00
IUUC-Hvu-047486 Hordeum vulgare 81.02 6.00e-149 519.00
IUUC-Lpe-051568 Leersia perrieri 69.50 3.00e-156 544.00
IUUC-Mtr-057760 Medicago truncatula 77.39 0.00e+00 707.00
IUUC-Mac-064942 Musa acuminata 71.98 0.00e+00 640.00
IUUC-Oba-075417 Oryza barthii 80.38 3.00e-154 537.00
IUUC-Obr-076033 Oryza brachyantha 72.73 2.00e-174 604.00
IUUC-Ogl-077441 Oryza glaberrima 66.12 6.00e-177 612.00
IUUC-Ogu-078877 Oryza glumaepatula 63.66 1.00e-167 581.00
IUUC-Oin-079461 Oryza indica 67.35 5.00e-166 576.00
IUUC-Olo-080716 Oryza longistaminata 67.45 2.00e-160 558.00
IUUC-Ome-081663 Oryza meridionalis 65.20 3.00e-169 588.00
IUUC-Oni-083097 Oryza nivara 63.86 6.00e-168 583.00
IUUC-Opu-083464 Oryza punctata 63.86 3.00e-167 580.00
IUUC-Oru-084848 Oryza rufipogon 63.86 6.00e-168 583.00
IUUC-Osa-085451 Oryza sativa 66.12 6.00e-177 612.00
IUUC-Pop-099269 Populus trichocarpa 79.51 0.00e+00 704.00
IUUC-Ppe-101285 Prunus persica 81.74 0.00e+00 718.00
IUUC-Sit-110550 Setaria italica 68.75 2.00e-175 607.00
IUUC-Sly-111395 Solanum lycopersicum 75.35 0.00e+00 699.00
IUUC-Stu-112356 Solanum tuberosum 75.75 0.00e+00 698.00
IUUC-Sbi-114386 Sorghum bicolor 74.31 2.00e-177 614.00
IUUC-Tsy-118931 Tarsius syrichta 40.61 5.00e-59 221.00
IUUC-Tca-121682 Theobroma cacao 81.01 0.00e+00 724.00
IUUC-Tae-123028 Triticum aestivum 72.89 2.00e-179 620.00
IUUC-Tur-126545 Triticum urartu 74.52 3.00e-136 477.00
IUUC-Vpa-130775 Vicugna pacos 38.85 2.00e-56 212.00
IUUC-Vvi-131748 Vitis vinifera 81.54 0.00e+00 733.00
Created Date 25-Jun-2017

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