iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112892

Ensembl Protein ID

PGSC0003DMT400068001

UniProt Accession

M1CI99; M1CI99_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401026447	PGSC0003DMT400067999	PGSC0003DMT400067999
PGSC0003DMG401026447	PGSC0003DMT400068001	PGSC0003DMT400068001

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	22.00	2.30e+00	27.70	IUUC-Spo-108230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEYESETLKR GYTTAPRNQN EGSNMAKRED RISELPVHII HQILCRTDLG VEEAARSCML 60
SKTWYYCWTS RPNLIFYQFD MTLENYVKLV DQSLRFHVEQ NLHLEQFILR YRDPEVDFHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATTTATG CATGTATTTC ATTTTTACCT TGAAAATTAT CTCACTGTGT CTAATATGAC 60
ACCGACTGCA TAATCAGATA ATCTCCAATG CAGTGGTCAT ATGCCGCCTG AATATGCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001116	Aegilops tauschii	23.40	1.00e-09	57.00
IUUC-Aly-006243	Arabidopsis lyrata	31.00	5.00e-04	38.10
IUUC-Bdi-014925	Brachypodium distachyon	25.40	8.00e-09	53.90
IUUC-Bol-015210	Brassica oleracea	28.57	3.00e-10	59.70
IUUC-Dre-027974	Danio rerio	23.24	7.00e-04	38.50
IUUC-Gac-042378	Gasterosteus aculeatus	24.65	3.00e-05	42.70
IUUC-Gma-043760	Glycine max	42.86	1.00e-06	46.60
IUUC-Hvu-047593	Hordeum vulgare	26.45	6.00e-09	54.70
IUUC-Lpe-051609	Leersia perrieri	25.24	2.00e-07	51.60
IUUC-Oba-074986	Oryza barthii	26.35	6.00e-06	45.80
IUUC-Ogl-077410	Oryza glaberrima	27.27	1.10e-02	33.90
IUUC-Ogu-078146	Oryza glumaepatula	26.58	2.00e-06	48.50
IUUC-Oin-079496	Oryza indica	27.27	1.00e-02	33.90
IUUC-Olo-080717	Oryza longistaminata	24.58	6.00e-06	45.10
IUUC-Ome-081133	Oryza meridionalis	24.41	3.00e-07	50.80
IUUC-Oni-082292	Oryza nivara	25.81	2.00e-04	41.60
IUUC-Opu-083299	Oryza punctata	24.26	1.00e-03	39.30
IUUC-Oru-085115	Oryza rufipogon	26.39	4.00e-06	47.40
IUUC-Osa-085903	Oryza sativa	27.27	1.00e-02	33.90
IUUC-Pop-099374	Populus trichocarpa	25.29	3.00e-15	75.90
IUUC-Spo-108230	Schizosaccharomyces pombe	25.00	4.40e-02	31.20
IUUC-Sit-110045	Setaria italica	26.11	1.00e-07	49.70
IUUC-Sbi-114314	Sorghum bicolor	24.14	6.00e-06	43.90
IUUC-Tru-118758	Takifugu rubripes	24.28	8.00e-05	41.60
IUUC-Tae-124429	Triticum aestivum	25.95	3.00e-05	42.00

Created Date

25-Jun-2017