iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101198

Ensembl Protein ID

EMJ18334

UniProt Accession

M5WXD6; M5WXD6_PRUPE

Genbank Protein ID

EMJ18334.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KB639030

Gene Name

MBD9; PRUPE_ppa000046mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa000046mg	EMJ18334	EMJ18334

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.40e-13	51.2	1206	1252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC+vCg  ++d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1206 VCKVCGIDKDDD-SVLLCDTCDAEYHTYCLNPP-LARIPEGN-WYCPSCV 1252
           8*****999977.7*******************.*******6.******6 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MELNDSTSDE LRDARPAAAE PTRSVLGIDL NEIPSPPETL PDSYDVVRSY HDHPSPPPGG 60
PAGVPGSARG SACPFCGKPE VRGHVVVCDG CERGFHLTCA GMRGRQAVNL EEWVCEECTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACTCA ACGATTCAAC TAGCGACGAA CTCAGAGACG CCAGGCCGGC CGCCGCCGAG 60
CCCACTCGCT CCGTGCTCGG CATCGATCTC AATGAGATCC CTTCCCCGCC CGAAACCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50014--BROMODOMAIN_2
PS51543--FYRC
PS51542--FYRN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF01429--MBD
PF00628--PHD
PF15612--WHIM1

SMART

SM00297--BROMO
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0003677--F:DNA binding
GO:0004402--F:histone acetyltransferase activity
GO:0008270--F:zinc ion binding
GO:0043966--P:histone H3 acetylation
GO:0043967--P:histone H4 acetylation
GO:0048573--P:photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated
GO:0010223--P:secondary shoot formation

KEGG

pper:PRUPE_ppa000046mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000077	Aegilops tauschii	45.94	0.00e+00	662.00
IUUC-Atr-002838	Amborella trichopoda	44.22	0.00e+00	1373.00
IUUC-Aca-004929	Anolis carolinensis	49.15	1.00e-13	72.00
IUUC-Aly-006097	Arabidopsis lyrata	49.47	0.00e+00	1488.00
IUUC-Ath-007218	Arabidopsis thaliana	48.54	0.00e+00	1440.00
IUUC-Bdi-014742	Brachypodium distachyon	38.14	5.00e-165	573.00
IUUC-Bol-015336	Brassica oleracea	48.42	0.00e+00	1486.00
IUUC-Bra-017998	Brassica rapa	48.59	0.00e+00	1481.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	54.72	6.00e-10	54.30
IUUC-Cne-026801	Cryptococcus neoformans	53.19	3.00e-14	73.60
IUUC-Fox-037887	Fusarium oxysporum	44.44	3.00e-10	59.70
IUUC-Ggr-039838	Gaeumannomyces graminis	54.35	2.00e-11	63.50
IUUC-Gma-042778	Glycine max	56.82	0.00e+00	1864.00
IUUC-Hvu-047583	Hordeum vulgare	34.19	2.00e-142	499.00
IUUC-Lpe-050785	Leersia perrieri	40.37	0.00e+00	1159.00
IUUC-Mor-056964	Magnaporthe oryzae	50.00	6.00e-10	58.50
IUUC-Mtr-058285	Medicago truncatula	53.73	0.00e+00	1728.00
IUUC-Mga-059236	Meleagris gallopavo	54.00	8.00e-14	72.80
IUUC-Mac-065069	Musa acuminata	45.65	0.00e+00	963.00
IUUC-Oba-075854	Oryza barthii	42.05	0.00e+00	1284.00
IUUC-Obr-076343	Oryza brachyantha	46.53	0.00e+00	919.00
IUUC-Ogl-077886	Oryza glaberrima	39.49	0.00e+00	660.00
IUUC-Ogu-078887	Oryza glumaepatula	40.16	0.00e+00	1297.00
IUUC-Olo-080668	Oryza longistaminata	42.15	0.00e+00	1282.00
IUUC-Ome-081800	Oryza meridionalis	41.77	0.00e+00	1277.00
IUUC-Oni-082593	Oryza nivara	42.04	0.00e+00	1284.00
IUUC-Opu-083363	Oryza punctata	41.82	0.00e+00	1278.00
IUUC-Oru-084298	Oryza rufipogon	41.90	0.00e+00	1282.00
IUUC-Osa-085487	Oryza sativa	38.14	7.00e-175	607.00
IUUC-Ppa-095893	Physcomitrella patens	39.93	2.00e-107	384.00
IUUC-Pgr-103434	Puccinia graminis	59.18	3.00e-17	82.00
IUUC-Sit-110633	Setaria italica	41.18	0.00e+00	1182.00
IUUC-Sre-115066	Sporisorium reilianum	44.00	1.00e-11	65.10
IUUC-Tca-121595	Theobroma cacao	59.18	0.00e+00	1980.00
IUUC-Tae-123821	Triticum aestivum	37.92	0.00e+00	1199.00
IUUC-Tur-126242	Triticum urartu	45.27	0.00e+00	662.00
IUUC-Uma-129445	Ustilago maydis	43.33	5.00e-12	66.20
IUUC-Vda-129876	Verticillium dahliae	50.00	4.00e-10	58.90
IUUC-Vvi-130929	Vitis vinifera	59.07	0.00e+00	1404.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence