iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114830

Ensembl Protein ID

Sb04g007940.1

UniProt Accession

A0A194YNN2; A0A194YNN2_SORBI

Genbank Protein ID

KXG29833.1

Protein Name

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G096400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g007940	Sb04g007940.1	Sb04g007940.1
Sb04g007940	Sb04g007940.2	Sb04g007940.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-09	38.0	297	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           + +tc +f  +  ++l+ +s  gti++ Dlr+
   Q: 297  EVITCAEFhpTHcNTLAYSSSKGTIRLIDLRQ 328
           679******6337999*************987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRFVATGVRG SPGVSWAGRA GGRRRANGSW QAFTVAWVSK RLACSTWWKC YVDIISAIEF 60
DKSGNHLATG DRGGRVVLFE RTDISDNASR RELERQEYQA ARHPEFRYKT EFQSHEPEFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAAACCAG CACACGGGGG GCGCAAAAAC GCCGGTCGAC CGGCACGAAC GGGATCGTCG 60
ACTCCCCTCC CCTTCTGACG CCCCCGCTCG CACGCTCCCC ACATCATCCT CCTCGCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR000009--PP2A_PR55
IPR018067--PP2A_PR55_CS
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS01024--PR55_1
PS01025--PR55_2
PS00678--WD_REPEATS_1

Pfam

PF00400--WD40

PRINTS

PR00600--PP2APR55

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex
GO:0019888--F:protein phosphatase regulator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Fal-037489	Ficedula albicollis	52.64	3.00e-125	440.00
IUUC-Gga-041033	Gallus gallus	53.07	7.00e-126	442.00
IUUC-Lch-050157	Latimeria chalumnae	53.07	2.00e-125	441.00
IUUC-Oan-073540	Ornithorhynchus anatinus	55.22	6.00e-94	336.00
IUUC-Ogl-077016	Oryza glaberrima	90.34	0.00e+00	872.00
IUUC-Ogu-078251	Oryza glumaepatula	90.13	0.00e+00	866.00
IUUC-Oin-079379	Oryza indica	90.55	0.00e+00	874.00
IUUC-Olo-080525	Oryza longistaminata	90.34	0.00e+00	865.00
IUUC-Oni-082387	Oryza nivara	89.60	0.00e+00	850.00
IUUC-Osa-085869	Oryza sativa	90.55	0.00e+00	874.00
IUUC-Pca-100882	Procavia capensis	56.86	5.00e-74	271.00
IUUC-Sit-110289	Setaria italica	93.68	0.00e+00	905.00
IUUC-Tur-126432	Triticum urartu	87.82	0.00e+00	792.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence