iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078400

Ensembl Protein ID

OGLUM02G19880.1

UniProt Accession

A0A0D9YTB9; A0A0D9YTB9_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G19880	OGLUM02G19880.1	OGLUM02G19880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-25	88.1	379	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           H d vtc++f   d ++++sGs Dg+++vWD+++ +
   Q: 379  HGDYVTCVQFnpVDeRYFISGSIDGKVRVWDVSDKR 414
           99*********9666****************98766 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MPRSDYSDDG EDDVFFDAFD DDDDDDDNNR SSTEISTSEA GYELWAGEPM SVRERRHRFL 60
KGMGFLEPGP TGTAFPQWLA EIATTDCCSF HDFEERISSI CSSFRSCFSD SILAATDNTN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAAGAT CAGACTATTC CGATGATGGA GAAGACGACG TCTTCTTCGA CGCGTTTGAC 60
GATGACGACG ACGACGACGA TAACAACAGA AGCTCAACGG AGATTAGTAC AAGTGAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051332	Leersia perrieri	65.70	0.00e+00	763.00
IUUC-Oba-075905	Oryza barthii	98.60	0.00e+00	1137.00
IUUC-Obr-076137	Oryza brachyantha	75.12	0.00e+00	802.00
IUUC-Ogl-077505	Oryza glaberrima	99.22	0.00e+00	1151.00
IUUC-Oin-079305	Oryza indica	99.53	0.00e+00	1182.00
IUUC-Olo-080274	Oryza longistaminata	99.23	0.00e+00	998.00
IUUC-Ome-081649	Oryza meridionalis	95.38	0.00e+00	1120.00
IUUC-Oni-082215	Oryza nivara	99.38	0.00e+00	1178.00
IUUC-Opu-083729	Oryza punctata	86.58	0.00e+00	1067.00
IUUC-Oru-084343	Oryza rufipogon	99.53	0.00e+00	1178.00
IUUC-Osa-085866	Oryza sativa	96.22	0.00e+00	774.00
IUUC-Sit-109994	Setaria italica	56.41	0.00e+00	659.00
IUUC-Sbi-114508	Sorghum bicolor	52.18	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence