iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114508

UUCD1 version

UUC-SoB-00703

Ensembl Protein ID

Sb04g022100.1

UniProt Accession

A0A194YQ85; A0A194YQ85_SORBI

Genbank Protein ID

KXG30352.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G1696002

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g022100	Sb04g022100.1	Sb04g022100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-22	77.2	372	404

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H d vtc++    d +++vsGs Dg+++vWD++
   Q: 372  HRDYVTCIQSnpVDaRYFVSGSIDGKVRVWDVS 404
           9*******9898889****************86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MYNSDGQDDI FLETSDDIRS STYFSARCST SDQLSASWGP DQDELWTSEL MSVNERRHRF 60
MIGMGFVKPI PTGITFSQWQ GEILADRAFR DLEERINSIC SSYRPSFSHC ASAPDSTRNS 120

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Nucleotide Sequence
(Fasta)

ATGTACAATA GCGATGGACA GGATGACATA TTCTTGGAGA CATCTGATGA TATAAGAAGT 60
TCAACATATT TCTCAGCTAG GTGCAGCACA AGTGACCAAT TATCAGCATC ATGGGGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051332	Leersia perrieri	47.75	8.00e-166	577.00
IUUC-Oba-075905	Oryza barthii	50.23	9.00e-162	563.00
IUUC-Obr-076137	Oryza brachyantha	52.13	2.00e-160	558.00
IUUC-Ogl-077505	Oryza glaberrima	50.38	3.00e-163	568.00
IUUC-Ogu-078400	Oryza glumaepatula	50.68	4.00e-166	577.00
IUUC-Oin-079305	Oryza indica	50.38	4.00e-165	574.00
IUUC-Ome-081649	Oryza meridionalis	51.36	2.00e-168	585.00
IUUC-Oni-082215	Oryza nivara	50.38	1.00e-164	572.00
IUUC-Opu-083729	Oryza punctata	51.09	1.00e-172	599.00
IUUC-Oru-084343	Oryza rufipogon	50.53	2.00e-165	575.00
IUUC-Sit-109994	Setaria italica	75.40	0.00e+00	937.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence