iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121298

Ensembl Protein ID

EOY16983

UniProt Accession

A0A061FJ88; A0A061FJ88_THECC

Genbank Protein ID

EOY16983.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001886

Gene Name

TCM_036069

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_036069	EOY16983	EOY16983

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-08	34.4	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp...CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d++ + ++ +   CgH+fh dC+ +w        ++ +CPlCr
   Q: 113  CSVCLGDYQAEDKLQQipaCGHTFHMDCIDHW------LANHTTCPLCR 155
           9*******55544433449*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVTGQEMSQS QNSSKQAGCC SSSTTSSAVS AELKLYQAFI FSVPIFFAFI LLFMFYLFYL 60
RRRRADWSSL RMRTALDNNN DLYMAELGLK KEVREMLPII IYKETFSIRD AQCSVCLGDY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTTCCA AAACTCTCCT TCTTCTTGAT GCAGATTTGC TGATCTAATC TTAAATCTTT 60
ATGTATTTTG GTTTACTCTC CTTTGCATAA AACCCAATCT CCAGCTCTGC ATTTTTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	60.45	5.00e-56	209.00
IUUC-Ath-007076	Arabidopsis thaliana	54.41	5.00e-57	213.00
IUUC-Bdi-014087	Brachypodium distachyon	61.33	9.00e-41	159.00
IUUC-Bol-016221	Brassica oleracea	55.67	5.00e-56	209.00
IUUC-Bra-017381	Brassica rapa	51.95	3.00e-38	150.00
IUUC-Gma-043458	Glycine max	61.25	2.00e-39	154.00
IUUC-Lpe-051002	Leersia perrieri	63.51	2.00e-43	168.00
IUUC-Mtr-058067	Medicago truncatula	65.13	8.00e-46	176.00
IUUC-Mac-065514	Musa acuminata	55.37	4.00e-43	167.00
IUUC-Oba-075393	Oryza barthii	63.33	7.00e-44	169.00
IUUC-Obr-076149	Oryza brachyantha	63.33	5.00e-44	169.00
IUUC-Ogl-077140	Oryza glaberrima	63.33	7.00e-44	169.00
IUUC-Ogu-078926	Oryza glumaepatula	63.33	7.00e-44	169.00
IUUC-Oin-080003	Oryza indica	56.36	8.00e-35	138.00
IUUC-Ome-081399	Oryza meridionalis	63.33	7.00e-44	169.00
IUUC-Oni-082750	Oryza nivara	63.33	7.00e-44	169.00
IUUC-Opu-083446	Oryza punctata	63.33	4.00e-44	170.00
IUUC-Oru-084873	Oryza rufipogon	63.33	7.00e-44	169.00
IUUC-Osa-085898	Oryza sativa	63.33	7.00e-44	169.00
IUUC-Pop-099279	Populus trichocarpa	57.07	2.00e-42	164.00
IUUC-Ppe-101232	Prunus persica	54.45	2.00e-53	201.00
IUUC-Smo-109572	Selaginella moellendorffii	45.99	1.00e-27	115.00
IUUC-Sit-110610	Setaria italica	62.42	3.00e-42	164.00
IUUC-Sly-111610	Solanum lycopersicum	72.99	9.00e-49	186.00
IUUC-Stu-112875	Solanum tuberosum	54.59	5.00e-48	183.00
IUUC-Sbi-114101	Sorghum bicolor	63.09	7.00e-43	166.00
IUUC-Tae-124847	Triticum aestivum	49.74	2.00e-43	167.00
IUUC-Tur-126109	Triticum urartu	61.87	6.00e-43	166.00
IUUC-Vvi-131331	Vitis vinifera	55.71	9.00e-52	195.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence