iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110422

Ensembl Protein ID

Si016624m

UniProt Accession

K3YQT0; K3YQT0_SETIT

Genbank Protein ID

KQL31378.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003528

Gene Name

LOC101765060; SETIT_016624mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si016624m.g	Si016624m	Si016624m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-33	114.8	262	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslelMrdPv++++G+ty+r+ I++w++ g++tcP+t+q+l++ +l+Pn++lr+li +wcee+++
   Q: 262  IPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQQKLQNLTLTPNYVLRSLIMQWCEEKGI 334
           8********************************************************************9986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MAAEAAAEIV REIAAVGAAD LAAAAEPLRA DCLRLARKVS LLSHLVAEVA EAGEGDAAAA 60
AWVRELVRAL EAARRFVDLG RAPPTPTAAA GASDQDATCN NTDLQFKYVT WQLQVALANL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG AGGCGGCGGC GGAGATCGTG CGGGAGATCG CGGCGGTGGG CGCCGCCGAC 60
CTGGCCGCCG CCGCCGAGCC GCTGCGCGCG GACTGCCTCC GCCTCGCGCG GAAGGTGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101765060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	84.53	0.00e+00	886.00
IUUC-Atr-002695	Amborella trichopoda	51.97	2.00e-161	561.00
IUUC-Aly-005917	Arabidopsis lyrata	48.71	2.00e-158	551.00
IUUC-Ath-006760	Arabidopsis thaliana	48.86	2.00e-157	548.00
IUUC-Bdi-014341	Brachypodium distachyon	82.82	0.00e+00	957.00
IUUC-Bol-016224	Brassica oleracea	50.81	1.00e-148	519.00
IUUC-Bra-017682	Brassica rapa	50.41	1.00e-152	532.00
IUUC-Gma-044210	Glycine max	53.52	4.00e-172	597.00
IUUC-Hvu-047676	Hordeum vulgare	91.45	0.00e+00	650.00
IUUC-Lpe-051513	Leersia perrieri	82.63	0.00e+00	962.00
IUUC-Mtr-058156	Medicago truncatula	52.36	4.00e-165	574.00
IUUC-Mac-065650	Musa acuminata	53.25	5.00e-173	600.00
IUUC-Oba-075045	Oryza barthii	82.57	0.00e+00	966.00
IUUC-Obr-076820	Oryza brachyantha	87.83	0.00e+00	799.00
IUUC-Ogl-077779	Oryza glaberrima	82.95	0.00e+00	976.00
IUUC-Ogu-078572	Oryza glumaepatula	82.95	0.00e+00	977.00
IUUC-Oin-079487	Oryza indica	82.79	0.00e+00	974.00
IUUC-Olo-080348	Oryza longistaminata	84.38	0.00e+00	907.00
IUUC-Ome-081282	Oryza meridionalis	82.79	0.00e+00	970.00
IUUC-Oni-083061	Oryza nivara	82.79	0.00e+00	974.00
IUUC-Opu-083297	Oryza punctata	83.44	0.00e+00	948.00
IUUC-Oru-084442	Oryza rufipogon	82.95	0.00e+00	976.00
IUUC-Osa-085919	Oryza sativa	82.95	0.00e+00	976.00
IUUC-Pop-099907	Populus trichocarpa	52.64	1.00e-169	588.00
IUUC-Ppe-101146	Prunus persica	52.04	9.00e-162	563.00
IUUC-Sly-111534	Solanum lycopersicum	52.00	5.00e-156	543.00
IUUC-Stu-112138	Solanum tuberosum	57.14	2.00e-159	555.00
IUUC-Sbi-114533	Sorghum bicolor	93.14	0.00e+00	1011.00
IUUC-Tca-121496	Theobroma cacao	53.28	1.00e-171	595.00
IUUC-Tae-125409	Triticum aestivum	80.30	0.00e+00	863.00
IUUC-Tur-126634	Triticum urartu	81.98	0.00e+00	846.00
IUUC-Vvi-131185	Vitis vinifera	52.58	1.00e-170	592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence