iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099399

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTR_0005s17580g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s17580	POPTR_0005s17580.1	POPTR_0005s17580.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	73.91	0.00e+00	934.00	IUUC-Ath-007209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MITNKKPRSS DTDSNYMRDD RTEMSEDDDR SPPSNSITHD SSPTRTCTPG PGSGSSSVPE 60
YLAPYPDQVL ENVLENVLWF LTSRKDRNAA SLVCRSWYRV EALTRSDLFI GNCYAVSPKR 120

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Nucleotide Sequence
(Fasta)

AGGCAGCATG GAGAATCCCG ATGCTTTACT CAGTCTATCA GACATCACAG CCTACTACTC 60
TTCTTCCCAC CAATTATACT AAAATAAACT AAGCAATCCT TTCCTTCCTC GCCTCTCTCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0000822--F:inositol hexakisphosphate binding
GO:0009734--P:auxin-activated signaling pathway

KEGG

pop:POPTR_0005s17580g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000712	Aegilops tauschii	63.72	0.00e+00	718.00
IUUC-Atr-002433	Amborella trichopoda	68.69	0.00e+00	830.00
IUUC-Aly-005787	Arabidopsis lyrata	77.93	0.00e+00	937.00
IUUC-Ath-007209	Arabidopsis thaliana	77.93	0.00e+00	934.00
IUUC-Bdi-014780	Brachypodium distachyon	65.71	0.00e+00	803.00
IUUC-Bol-015975	Brassica oleracea	71.66	0.00e+00	906.00
IUUC-Bra-016954	Brassica rapa	76.27	0.00e+00	901.00
IUUC-Gma-044368	Glycine max	73.23	0.00e+00	917.00
IUUC-Hvu-047338	Hordeum vulgare	63.65	0.00e+00	796.00
IUUC-Lpe-051042	Leersia perrieri	65.29	0.00e+00	771.00
IUUC-Mtr-058693	Medicago truncatula	74.70	0.00e+00	902.00
IUUC-Mac-065664	Musa acuminata	63.79	0.00e+00	738.00
IUUC-Oba-075211	Oryza barthii	57.31	0.00e+00	671.00
IUUC-Obr-076665	Oryza brachyantha	66.72	0.00e+00	788.00
IUUC-Ogl-077786	Oryza glaberrima	66.38	0.00e+00	785.00
IUUC-Ogu-078876	Oryza glumaepatula	66.20	0.00e+00	780.00
IUUC-Oin-080178	Oryza indica	66.31	0.00e+00	774.00
IUUC-Olo-080421	Oryza longistaminata	57.14	0.00e+00	668.00
IUUC-Ome-081394	Oryza meridionalis	66.72	0.00e+00	785.00
IUUC-Oni-082189	Oryza nivara	66.55	0.00e+00	783.00
IUUC-Opu-083772	Oryza punctata	66.90	0.00e+00	788.00
IUUC-Oru-084414	Oryza rufipogon	66.72	0.00e+00	785.00
IUUC-Osa-085414	Oryza sativa	66.72	0.00e+00	787.00
IUUC-Ppe-101292	Prunus persica	75.40	0.00e+00	914.00
IUUC-Sit-110096	Setaria italica	65.17	0.00e+00	788.00
IUUC-Sly-111561	Solanum lycopersicum	71.36	0.00e+00	926.00
IUUC-Stu-111941	Solanum tuberosum	71.08	0.00e+00	917.00
IUUC-Sbi-114235	Sorghum bicolor	66.96	0.00e+00	787.00
IUUC-Tca-121179	Theobroma cacao	78.04	0.00e+00	1023.00
IUUC-Tae-123328	Triticum aestivum	66.67	0.00e+00	781.00
IUUC-Tur-126251	Triticum urartu	67.10	0.00e+00	649.00
IUUC-Vvi-131482	Vitis vinifera	82.81	0.00e+00	987.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence