iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076263

Ensembl Protein ID

OB02G42830.1

UniProt Accession

J3LI16; J3LI16_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G42830	OB02G42830.1	OB02G42830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-06	28.3	247	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle++   +  +  lpC H fh  C   w       + + rCP+Cr
   Q: 247  CAVCLEELragEA-VAHLPCAHRFHWGCAVPW------VQAASRCPVCR 288
           ********55333.777***************......**********8 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MKLEHSMKVS IPSLMVVYQF YGSIALVLLN LYRYAELLAQ DEGHESNVQF TFTVHKFTES 60
FSKKNLALDS ASTCLSSCVI CHVDEWCWLM RLIQRVCHND PLHLWKKKWE YEVTYFSAGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTTG AGCACTCAAT GAAGGTAAGG TAGGCTACTA ATCAGGAAAG AACTCATTCC 60
TGTAGTAAAT CATCACGTAT AAACAGAAGA AGAAAAGAAA CATTTTTTAA GCTCTATTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014038	Brachypodium distachyon	49.40	5.00e-22	96.70
IUUC-Hvu-047185	Hordeum vulgare	42.86	1.00e-18	84.30
IUUC-Lpe-051053	Leersia perrieri	50.29	2.00e-20	91.70
IUUC-Oba-075651	Oryza barthii	46.36	7.00e-19	86.30
IUUC-Ogl-077670	Oryza glaberrima	54.55	5.00e-26	109.00
IUUC-Ogu-078377	Oryza glumaepatula	90.00	7.00e-18	82.40
IUUC-Oin-079883	Oryza indica	47.68	1.00e-19	88.60
IUUC-Ome-081431	Oryza meridionalis	51.91	1.00e-23	102.00
IUUC-Oni-082580	Oryza nivara	90.00	9.00e-18	82.00
IUUC-Opu-083785	Oryza punctata	44.13	2.00e-19	87.80
IUUC-Oru-084516	Oryza rufipogon	47.68	6.00e-20	90.10
IUUC-Osa-085652	Oryza sativa	55.11	9.00e-27	112.00
IUUC-Sit-110008	Setaria italica	87.50	3.00e-17	80.90
IUUC-Sbi-114019	Sorghum bicolor	76.19	8.00e-15	72.80
IUUC-Tca-120960	Theobroma cacao	33.11	2.00e-12	64.70
IUUC-Tae-125500	Triticum aestivum	45.45	3.00e-18	84.00
IUUC-Tur-126628	Triticum urartu	47.85	2.00e-19	87.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence