iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114204

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G348500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g037520	Sb04g037520.1	Sb04g037520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-09	39.1	171	213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f++g  ++ lp C Hvfh+ C+ +w       + +++CPlCr
   Q: 171  CAVCLGEFEEGdrVRMLPaCLHVFHLGCVDAW------LQSNASCPLCR 213
           ********55444999****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDASHGSSSS SASIFPMPQI PALLYAPPPA AALPSSSLSL SSYSSSSSLR GHAPSITSFP 60
ILVLTVLGIL AASVILLAYY VFVIRCCLTW HRGSSGGSFS SSDVAGLIVS RRGRRPQRTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCGA GCCACGGCAG CAGCAGCAGC AGCGCCAGCA TCTTCCCGAT GCCGCAGATC 60
CCGGCGCTGC TCTACGCCCC ACCACCGGCG GCGGCATTGC CATCTTCTTC CCTCTCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g037520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001043	Aegilops tauschii	40.80	4.00e-21	94.00
IUUC-Aly-006087	Arabidopsis lyrata	38.41	5.00e-35	140.00
IUUC-Ath-006741	Arabidopsis thaliana	38.55	1.00e-35	143.00
IUUC-Bdi-014676	Brachypodium distachyon	44.76	2.00e-26	110.00
IUUC-Bol-015259	Brassica oleracea	38.15	2.00e-34	138.00
IUUC-Bra-016752	Brassica rapa	37.95	3.00e-34	138.00
IUUC-Hvu-047348	Hordeum vulgare	56.67	2.00e-25	108.00
IUUC-Lpe-051091	Leersia perrieri	40.88	2.00e-35	142.00
IUUC-Mtr-058428	Medicago truncatula	35.26	1.00e-29	122.00
IUUC-Mac-065300	Musa acuminata	46.25	1.00e-38	152.00
IUUC-Oba-075181	Oryza barthii	41.84	6.00e-40	157.00
IUUC-Obr-076646	Oryza brachyantha	43.54	1.00e-40	159.00
IUUC-Ogl-077643	Oryza glaberrima	40.85	4.00e-40	157.00
IUUC-Ogu-078678	Oryza glumaepatula	41.84	5.00e-40	157.00
IUUC-Oin-080156	Oryza indica	42.55	1.00e-40	159.00
IUUC-Olo-080454	Oryza longistaminata	43.82	1.00e-41	162.00
IUUC-Oni-082085	Oryza nivara	41.13	7.00e-39	154.00
IUUC-Opu-083709	Oryza punctata	41.49	2.00e-37	148.00
IUUC-Oru-084579	Oryza rufipogon	41.49	3.00e-39	155.00
IUUC-Osa-085466	Oryza sativa	40.14	2.00e-39	155.00
IUUC-Sit-110640	Setaria italica	64.63	5.00e-42	164.00
IUUC-Sly-111856	Solanum lycopersicum	40.00	3.00e-34	138.00
IUUC-Tae-122936	Triticum aestivum	47.40	3.00e-30	124.00
IUUC-Tur-126376	Triticum urartu	45.60	1.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence