iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126376

Ensembl Protein ID

TRIUR3_17529-P1

UniProt Accession

M7ZLQ1; M7ZLQ1_TRIUA

Genbank Protein ID

EMS49014.1

Protein Name

RING-H2 finger protein ATL1

Genbank Nucleotide ID

KD247702

Gene Name

TRIUR3_17529

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_17529	TRIUR3_17529-T1	TRIUR3_17529-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.0	347	389

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   ++ +++lp C Hvfha+C+  w        + ++CPlCr
   Q: 347  CAVCLGEFqegER-VRLLPgCLHVFHAECIDTW------LHGCANCPLCR 389
           ********66444.*******************......**********8 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

METRSASSVG GINSSAATCK AENVARKLRR RRHQERDAAA VMQGGLIWTM DVGRQALRDL 60
PLARHGISVH LASGSQAAQG IYSFCKLFDV QSVQELQSEK RKNARLIEAS NHVDDASESD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGACGC GATCCGCCTC GTCCGTCGGC GGCATCAATT CGTCGGCTGC GACTTGCAAG 60
GCGGAGAATG TTGCCCGCAA GTTGCGGCGA CGCAGGCATC AAGAGAGGGA CGCGGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001043	Aegilops tauschii	70.05	5.00e-73	266.00
IUUC-Aly-006087	Arabidopsis lyrata	42.59	4.00e-36	144.00
IUUC-Ath-006741	Arabidopsis thaliana	41.98	4.00e-35	140.00
IUUC-Bdi-014676	Brachypodium distachyon	56.28	1.00e-43	167.00
IUUC-Bol-015196	Brassica oleracea	41.90	4.00e-34	137.00
IUUC-Bra-017007	Brassica rapa	41.90	6.00e-33	133.00
IUUC-Lpe-051091	Leersia perrieri	56.54	3.00e-39	154.00
IUUC-Mac-065300	Musa acuminata	42.57	5.00e-39	153.00
IUUC-Oba-075181	Oryza barthii	57.84	6.00e-40	157.00
IUUC-Obr-076646	Oryza brachyantha	58.16	2.00e-41	161.00
IUUC-Ogl-077643	Oryza glaberrima	57.84	2.00e-40	158.00
IUUC-Ogu-078678	Oryza glumaepatula	57.84	7.00e-40	157.00
IUUC-Oin-080156	Oryza indica	59.47	1.00e-41	162.00
IUUC-Olo-080454	Oryza longistaminata	55.29	2.00e-41	162.00
IUUC-Oni-082085	Oryza nivara	57.37	5.00e-40	157.00
IUUC-Opu-083709	Oryza punctata	49.15	2.00e-41	161.00
IUUC-Oru-084579	Oryza rufipogon	57.30	3.00e-39	154.00
IUUC-Osa-085466	Oryza sativa	56.76	6.00e-39	153.00
IUUC-Ppe-101210	Prunus persica	39.41	9.00e-29	120.00
IUUC-Sit-110640	Setaria italica	56.36	1.00e-34	139.00
IUUC-Sbi-114204	Sorghum bicolor	46.89	4.00e-31	127.00
IUUC-Tae-122715	Triticum aestivum	95.82	3.00e-116	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence