iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111159

Ensembl Protein ID

Solyc02g082420.2.1

UniProt Accession

K4BAB2; K4BAB2_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g082420.2	Solyc02g082420.2.1	Solyc02g082420.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-09	37.7	155	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl ++   d+ +vlp CgH fh++C+  w         + +CP Cr
   Q: 155  CAICLAEYavGDEIRVLPqCGHSFHLQCIDTW------LGSHSSCPSCR 197
           ********99666*******************......99********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVVFYGRPQF ISFFVFLQHK QIQVSNIFYI TYRHLNHTIV LFLLYCSIFI MTRPSRFLLS 60
TNSSSTPAAE PPSTVTVESD FVVILAALLC ALICVVGLIA VARCAWLRRG IGAGGNGGSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGTTT TCTATGGTCG CCCTCAGTTT ATTTCATTTT TTGTCTTCCT TCAACACAAA 60
CAAATTCAGG TAGCTTCACG TGTCTTTGTT TCTTAATACT AATTTAATTT ATGCGTATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005492	Arabidopsis lyrata	63.41	4.00e-47	179.00
IUUC-Gma-043769	Glycine max	73.33	4.00e-43	167.00
IUUC-Mtr-057800	Medicago truncatula	67.98	2.00e-47	181.00
IUUC-Oba-075661	Oryza barthii	53.19	1.00e-25	108.00
IUUC-Ogl-077507	Oryza glaberrima	48.78	9.00e-29	118.00
IUUC-Ogu-078762	Oryza glumaepatula	45.98	1.00e-29	121.00
IUUC-Oni-082529	Oryza nivara	45.40	3.00e-36	145.00
IUUC-Opu-083589	Oryza punctata	52.86	3.00e-28	118.00
IUUC-Oru-084673	Oryza rufipogon	48.78	8.00e-29	119.00
IUUC-Pop-099472	Populus trichocarpa	62.78	3.00e-43	167.00
IUUC-Ppe-101319	Prunus persica	70.24	1.00e-54	204.00
IUUC-Sit-110757	Setaria italica	55.10	1.00e-27	115.00
IUUC-Stu-112368	Solanum tuberosum	95.34	2.00e-81	293.00
IUUC-Vvi-131638	Vitis vinifera	61.90	1.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence