iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112354

Ensembl Protein ID

PGSC0003DMT400014987

UniProt Accession

M1A579; M1A579_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005849	PGSC0003DMT400014987	PGSC0003DMT400014987

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-21	77.0	396	428

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H++ vtc++f   +d++++sGs Dg++++W+++
   Q: 396  HNNYVTCVEFnpmDDNYFISGSIDGKVRLWEVH 428
           999********9877****************86 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGTYSETEED SFFDIRAETG SLSDLGLDGS DACTRNEISE RALGYEFWTQ DPESVDERRH 60
RFLKWMGLNS NCDRSDCSDE RKTSTDRIRD DNETVLASSD AEGNFFSGRS SQSFESNEAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAAAAGG CAGAAAGAAA GAATGAAGAA AGAAGAATAG CGACTCTTTC TCTTTCACCT 60
TTCCACCTTC ATACATTACC CTTTTCTTTG AAATCTTCAA TTTCTTTGAC TTAATATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	48.63	1.00e-127	449.00
IUUC-Atr-002755	Amborella trichopoda	48.77	0.00e+00	643.00
IUUC-Bdi-014664	Brachypodium distachyon	39.97	1.00e-140	492.00
IUUC-Cre-022638	Chlamydomonas reinhardtii	31.00	3.00e-19	87.80
IUUC-Hvu-047828	Hordeum vulgare	48.02	1.00e-134	471.00
IUUC-Mac-065324	Musa acuminata	44.26	2.00e-154	538.00
IUUC-Oba-075653	Oryza barthii	40.37	8.00e-126	443.00
IUUC-Obr-076256	Oryza brachyantha	42.38	7.00e-133	466.00
IUUC-Ogl-077818	Oryza glaberrima	41.92	7.00e-131	460.00
IUUC-Ogu-078138	Oryza glumaepatula	40.24	2.00e-126	445.00
IUUC-Oin-079480	Oryza indica	41.92	1.00e-131	462.00
IUUC-Olo-080838	Oryza longistaminata	42.06	2.00e-131	462.00
IUUC-Ome-081177	Oryza meridionalis	41.84	5.00e-143	500.00
IUUC-Oni-082466	Oryza nivara	41.92	9.00e-132	462.00
IUUC-Opu-083616	Oryza punctata	40.84	8.00e-126	443.00
IUUC-Oru-084265	Oryza rufipogon	40.24	8.00e-127	446.00
IUUC-Osa-085283	Oryza sativa	41.92	8.00e-132	462.00
IUUC-Ppe-101343	Prunus persica	49.67	0.00e+00	674.00
IUUC-Sly-111646	Solanum lycopersicum	92.77	0.00e+00	1317.00
IUUC-Tae-122988	Triticum aestivum	44.43	3.00e-136	478.00
IUUC-Tur-126616	Triticum urartu	45.47	7.00e-131	460.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence