iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112646

Ensembl Protein ID

PGSC0003DMT400037111

UniProt Accession

M1B4U2; M1B4U2_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400014305	PGSC0003DMT400037111	PGSC0003DMT400037111
PGSC0003DMG400014305	PGSC0003DMT400037112	PGSC0003DMT400037112

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-24	84.5	144	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v ++a+ s+ + l sGs D++++vWD  +g +
   Q: 144  GHQKVVAGIALpSGsDKLYSGSTDKSVRVWDCQSGQC 180
           89999******966799**************999987 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDGSKRVFQR LGPSSQGDNS NNKQQKVCFH WRAGRCNRFP CPFLHRELPG PPQQQQQHAA 60
GNGMSSSKRP HGFSDDNRGA GMRRNPNFNN TWGRTAAGGG AVVRKTEKVC NYWVKGNCTY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATAACCCC CGTTACTTAC CTGGTCGTAA AGTTTACGCT GTCGAAGTAG TATACAAATT 60
GGGGATCTTC TCCTCCAAAT TAATTTTCTG CAACTCCAAA ATTAGGGTTT CCAATTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	42.47	6.00e-70	256.00
IUUC-Atr-002831	Amborella trichopoda	56.02	3.00e-139	487.00
IUUC-Aly-005699	Arabidopsis lyrata	63.51	2.00e-161	560.00
IUUC-Ath-007223	Arabidopsis thaliana	64.50	1.00e-166	577.00
IUUC-Bdi-014857	Brachypodium distachyon	56.59	1.00e-142	498.00
IUUC-Bol-016382	Brassica oleracea	62.73	2.00e-158	551.00
IUUC-Bra-017102	Brassica rapa	63.64	9.00e-161	558.00
IUUC-Gma-042894	Glycine max	65.38	5.00e-159	552.00
IUUC-Hvu-047824	Hordeum vulgare	54.85	6.00e-110	389.00
IUUC-Lpe-051596	Leersia perrieri	53.82	3.00e-104	370.00
IUUC-Mtr-058068	Medicago truncatula	61.26	2.00e-149	520.00
IUUC-Mac-065071	Musa acuminata	63.74	1.00e-156	544.00
IUUC-Oba-075769	Oryza barthii	51.08	9.00e-119	419.00
IUUC-Obr-076011	Oryza brachyantha	57.01	3.00e-146	510.00
IUUC-Ogl-077742	Oryza glaberrima	39.23	2.00e-78	284.00
IUUC-Ogu-078248	Oryza glumaepatula	51.40	2.00e-122	431.00
IUUC-Oin-079981	Oryza indica	58.88	3.00e-147	513.00
IUUC-Olo-080571	Oryza longistaminata	51.24	2.00e-111	394.00
IUUC-Ome-081598	Oryza meridionalis	49.66	1.00e-120	424.00
IUUC-Oni-082711	Oryza nivara	49.66	7.00e-121	426.00
IUUC-Opu-083451	Oryza punctata	54.75	4.00e-143	499.00
IUUC-Oru-085129	Oryza rufipogon	51.32	2.00e-117	414.00
IUUC-Osa-085619	Oryza sativa	57.10	2.00e-104	370.00
IUUC-Oar-089558	Ovis aries	25.67	6.00e-16	78.20
IUUC-Ppa-096012	Physcomitrella patens	52.74	4.00e-104	370.00
IUUC-Pop-099994	Populus trichocarpa	63.81	5.00e-159	552.00
IUUC-Ppe-101609	Prunus persica	68.51	1.00e-175	607.00
IUUC-Smo-108900	Selaginella moellendorffii	47.15	1.00e-95	342.00
IUUC-Sit-109731	Setaria italica	55.87	9.00e-137	478.00
IUUC-Sly-111514	Solanum lycopersicum	97.91	0.00e+00	818.00
IUUC-Sbi-114748	Sorghum bicolor	54.97	8.00e-139	485.00
IUUC-Tgu-117222	Taeniopygia guttata	26.56	5.00e-17	81.60
IUUC-Tca-121658	Theobroma cacao	62.39	3.00e-156	543.00
IUUC-Tae-125577	Triticum aestivum	55.58	4.00e-142	496.00
IUUC-Tur-126095	Triticum urartu	52.32	8.00e-80	290.00
IUUC-Vvi-131444	Vitis vinifera	69.84	0.00e+00	625.00
IUUC-Xtr-132043	Xenopus tropicalis	26.42	4.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence