iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114507

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G463100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g043460	Sb01g043460.1	Sb01g043460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.6	226	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ f   d+++ l+CgH fh +Cl+ w       +k + CP+Cr
   Q: 226  CSICLDGFydGDELIRLRCGHRFHSTCLEPW------VRKCADCPYCR 267
           ********88445999***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTSASELFTA RRGARGGRLS DPDPDPDPDP HADALRDQHG IGGRRRRRGC RPRRQLDAAG 60
DVRQHLHTGA PPPRRRGSYT DQILSYIDNN NIGDSAARRN RLDRLMFRTN ERLPGAVLQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGCCTCA TCCGGTACCG CCATGACGAG CGCCTCCGAG CTCTTCACCG CGCGACGCGG 60
CGCCCGTGGG GGCCGCCTCT CCGATCCCGA CCCGGACCCG GACCCGGATC CGCACGCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g043460

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006173	Arabidopsis lyrata	36.53	3.00e-16	77.80
IUUC-Bdi-014868	Brachypodium distachyon	82.18	2.00e-110	390.00
IUUC-Bol-015528	Brassica oleracea	42.70	4.00e-16	77.00
IUUC-Bra-016749	Brassica rapa	35.20	4.00e-18	84.00
IUUC-Hvu-047572	Hordeum vulgare	85.20	4.00e-87	312.00
IUUC-Mtr-058054	Medicago truncatula	48.15	4.00e-20	90.50
IUUC-Mac-064949	Musa acuminata	48.54	2.00e-29	122.00
IUUC-Oba-075741	Oryza barthii	82.99	5.00e-88	315.00
IUUC-Obr-076821	Oryza brachyantha	82.99	6.00e-88	315.00
IUUC-Ogl-077510	Oryza glaberrima	84.09	4.00e-103	366.00
IUUC-Oin-080050	Oryza indica	84.09	3.00e-103	367.00
IUUC-Olo-080497	Oryza longistaminata	82.99	6.00e-78	282.00
IUUC-Ome-081477	Oryza meridionalis	84.55	1.00e-103	368.00
IUUC-Oni-083119	Oryza nivara	84.09	3.00e-103	367.00
IUUC-Opu-083834	Oryza punctata	81.58	2.00e-64	236.00
IUUC-Osa-086007	Oryza sativa	84.55	1.00e-103	368.00
IUUC-Pop-099358	Populus trichocarpa	40.77	5.00e-22	97.10
IUUC-Ppe-101691	Prunus persica	38.32	7.00e-19	86.70
IUUC-Sit-110752	Setaria italica	90.51	9.00e-112	395.00
IUUC-Tca-121654	Theobroma cacao	36.91	9.00e-20	89.70
IUUC-Tae-123420	Triticum aestivum	78.62	3.00e-101	360.00
IUUC-Vvi-131679	Vitis vinifera	41.95	7.00e-26	110.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence