iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110288

Ensembl Protein ID

Si033988m

UniProt Accession

K4A534; K4A534_SETIT

Genbank Protein ID

KQK91644.1; KQK91646.1; KQK91647.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003536; CM003536; CM003536

Gene Name

LOC101786587; SETIT_033987mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si033987m.g	Si033988m	Si033988m
Si033987m.g	Si033991m	Si033991m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-22	77.3	456	491
UBD/Beta-Prp	3.50e-40	139.0	415	677

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v+++af  ++  l +++++dD+tikvW+ ++g
   Q: 456  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSG 491
           99*********97653359************98877 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..s 105
           ++ + +spd++l+ +++ ++ ++++++  g+ +r+      h ++v+++ f +  k   ++t+++D+tikvw+  +g    +++ghe+ v+s+  +   +
   Q: 415  VNRIIWSPDGTLFGVAYSRHIVQIYSYNGGDDIRQHleiDAHVGGVNDIAFAHPNKqlCIITCGDDKTIKVWEATSGAKQFSFEGHEAPVYSVCPHYkeN 514
           566788************************99665323389**********99888899*********************************85554438 PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr....tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
            +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+++ +     +  W+ + g + rt +g  ++s   ++fd ++++++++++ 
   Q: 515  IQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYSADGSRLFSCGTSKegesHLVEWNESEGAVKRTYQGFRKRSMGVVQFDTTRNRFLAAGDE 613
           8***************99998777756555.559999999999*999999875422224555999*********************************** PP
   S: 202  gtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlql 262
             vk+wd+ ++  + t  +    + s  +rf +++++l++ + D+ ++i  + +   ll+tl++
   Q: 614  FMVKIWDMDNTGLLTTIDADGGLPASprIRFNKEGTLLAVSTLDNGVKILaNADGLRLLRTLEN 677
           *********999999999998777653378889999999999****999656666666666655 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGCAAGTC TCCAACCTGC CTCGGTGATT TGGTGGTCTC CGGCAACCAG GATCGTCGCC 60
GGCGGCGGTC GTTCCCGCGG CGAGATCGAT CGGATCGATC CACGCTCAAA GCTTCCAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR011048--Haem_d1
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	90.62	0.00e+00	2081.00
IUUC-Atr-002737	Amborella trichopoda	78.35	0.00e+00	1748.00
IUUC-Aly-005472	Arabidopsis lyrata	77.61	0.00e+00	1730.00
IUUC-Ath-007640	Arabidopsis thaliana	76.73	0.00e+00	1736.00
IUUC-Bdi-014914	Brachypodium distachyon	90.66	0.00e+00	2044.00
IUUC-Bol-015359	Brassica oleracea	76.80	0.00e+00	1735.00
IUUC-Bra-016893	Brassica rapa	76.54	0.00e+00	1727.00
IUUC-Gma-043911	Glycine max	80.58	0.00e+00	1825.00
IUUC-Hvu-047688	Hordeum vulgare	91.04	0.00e+00	1962.00
IUUC-Lpe-051514	Leersia perrieri	89.81	0.00e+00	1986.00
IUUC-Mtr-058037	Medicago truncatula	80.76	0.00e+00	1785.00
IUUC-Mac-065382	Musa acuminata	83.15	0.00e+00	1908.00
IUUC-Oba-075912	Oryza barthii	92.58	0.00e+00	2053.00
IUUC-Obr-076921	Oryza brachyantha	92.77	0.00e+00	2085.00
IUUC-Ogl-077334	Oryza glaberrima	92.60	0.00e+00	2077.00
IUUC-Ogu-078494	Oryza glumaepatula	92.60	0.00e+00	2077.00
IUUC-Oin-079720	Oryza indica	91.15	0.00e+00	2066.00
IUUC-Olo-081034	Oryza longistaminata	88.99	0.00e+00	2032.00
IUUC-Ome-081778	Oryza meridionalis	92.69	0.00e+00	2084.00
IUUC-Oni-082412	Oryza nivara	92.26	0.00e+00	2054.00
IUUC-Opu-083406	Oryza punctata	90.97	0.00e+00	2016.00
IUUC-Oru-084328	Oryza rufipogon	92.48	0.00e+00	2065.00
IUUC-Osa-085765	Oryza sativa	92.60	0.00e+00	2077.00
IUUC-Pop-098876	Populus trichocarpa	78.03	0.00e+00	1781.00
IUUC-Ppe-101370	Prunus persica	80.79	0.00e+00	1856.00
IUUC-Sly-111739	Solanum lycopersicum	79.03	0.00e+00	1803.00
IUUC-Stu-112409	Solanum tuberosum	69.88	0.00e+00	1584.00
IUUC-Sbi-114078	Sorghum bicolor	95.57	0.00e+00	2129.00
IUUC-Tca-121628	Theobroma cacao	79.11	0.00e+00	1813.00
IUUC-Tae-125775	Triticum aestivum	91.56	0.00e+00	2108.00
IUUC-Tur-126412	Triticum urartu	89.66	0.00e+00	2070.00
IUUC-Vvi-131079	Vitis vinifera	79.53	0.00e+00	1794.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence