iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112409

Ensembl Protein ID

PGSC0003DMT400079377

UniProt Accession

M1D1Q8; M1D1Q8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400030898	PGSC0003DMT400079377	PGSC0003DMT400079377

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-18	67.8	466	500
UBD/Beta-Prp	1.50e-48	166.7	422	672

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtl..lvsGsdDgtikvWDlrt 32
           H++sv++laf  +++   +v+++dD  ikvWD  +
   Q: 466  HSGSVNDLAFsfPNKQicIVTCGDDRLIKVWDAVS 500
           **********998744478*************765 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgh 93
           ++ ++ v +spd++l+ +++  + + v++++ g+      +++ h++ v+++ fs   k   +vt+++Dr+ikvwd  +g   +t++gh
   Q: 422  SASVNRVMWSPDGTLFGVAFSKHLVHVYSYHGGDDlrnHLEIEAHSGSVNDLAFSFPNKqiCIVTCGDDRLIKVWDAVSGAKQYTFEGH 510
           34455566677777777777777777777777766333334577777777777764433356777777777777777777777777777 PP
   S: 94   edsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtlt 176
           e+ v+s+  +   s +++ s+  d  i+ w  ++     + +++ ++++ +++++ dg  l+s+++++    + +    + g + rt++
   Q: 511  EAPVYSVCPHHkeSIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHSST-TMAYSADGTRLFSCGTNKEGESYLVewneSEGAVKRTFS 598
           7777776555543447777777777777776666555554444333222.233444446666666665544433333336777777777 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiri 248
           g  +++   ++fd ++++++++++  t+k+w++ + + + t  +    +   ++rf +++ +l++ +sD+ ++i
   Q: 599  GLGKRAGGVVQFDTTKNRFLAAGDEFTIKFWEMDSVNLLTTTDADGGLPAspCLRFNKEGMLLAVSTSDNGLKI 672
           76777777777777777777777777777777777776666666554443225666666666666666766666 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKDAVHKLEQ ESGFYFNMRH FDEMVGNGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRNDR SKAVEILVKD LKVFSAFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTCTTTC TCTCTCTTCC ATAAAAAAAA GTACTCAAAA TTCTACCTTT TTTGTTTCTC 60
TCTCATATAT ATAGACACAA AAAACCTTGG ATCTATTTTT TTTTTGTTTA GTCTCTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

sot:102582783

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	70.11	0.00e+00	1627.00
IUUC-Atr-002737	Amborella trichopoda	74.64	0.00e+00	1687.00
IUUC-Aly-006463	Arabidopsis lyrata	71.37	0.00e+00	1603.00
IUUC-Ath-007634	Arabidopsis thaliana	71.55	0.00e+00	1617.00
IUUC-Bdi-014914	Brachypodium distachyon	70.04	0.00e+00	1592.00
IUUC-Bol-015812	Brassica oleracea	71.67	0.00e+00	1654.00
IUUC-Bra-016964	Brassica rapa	71.14	0.00e+00	1639.00
IUUC-Gma-043977	Glycine max	79.02	0.00e+00	1784.00
IUUC-Hvu-047688	Hordeum vulgare	70.66	0.00e+00	1537.00
IUUC-Lpe-051514	Leersia perrieri	68.01	0.00e+00	1524.00
IUUC-Mtr-058586	Medicago truncatula	79.21	0.00e+00	1807.00
IUUC-Mac-065382	Musa acuminata	69.49	0.00e+00	1623.00
IUUC-Oba-075912	Oryza barthii	70.43	0.00e+00	1595.00
IUUC-Obr-076921	Oryza brachyantha	70.02	0.00e+00	1605.00
IUUC-Ogl-077334	Oryza glaberrima	69.87	0.00e+00	1605.00
IUUC-Ogu-078494	Oryza glumaepatula	69.87	0.00e+00	1605.00
IUUC-Oin-079720	Oryza indica	69.13	0.00e+00	1597.00
IUUC-Olo-081034	Oryza longistaminata	68.67	0.00e+00	1581.00
IUUC-Ome-081778	Oryza meridionalis	69.87	0.00e+00	1607.00
IUUC-Oni-082412	Oryza nivara	70.43	0.00e+00	1595.00
IUUC-Opu-083406	Oryza punctata	68.95	0.00e+00	1559.00
IUUC-Oru-084328	Oryza rufipogon	69.96	0.00e+00	1597.00
IUUC-Osa-085765	Oryza sativa	69.87	0.00e+00	1605.00
IUUC-Ppa-095814	Physcomitrella patens	65.93	0.00e+00	1484.00
IUUC-Pop-099918	Populus trichocarpa	78.52	0.00e+00	1781.00
IUUC-Ppe-101506	Prunus persica	78.93	0.00e+00	1803.00
IUUC-Smo-109617	Selaginella moellendorffii	65.53	0.00e+00	1452.00
IUUC-Sit-110288	Setaria italica	70.03	0.00e+00	1581.00
IUUC-Sly-111854	Solanum lycopersicum	97.72	0.00e+00	2147.00
IUUC-Sbi-114078	Sorghum bicolor	70.44	0.00e+00	1578.00
IUUC-Tca-121699	Theobroma cacao	78.71	0.00e+00	1815.00
IUUC-Tae-125775	Triticum aestivum	70.44	0.00e+00	1637.00
IUUC-Tur-126412	Triticum urartu	70.44	0.00e+00	1626.00
IUUC-Vvi-131077	Vitis vinifera	79.54	0.00e+00	1816.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence