iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058332

Ensembl Protein ID

KEH30143

UniProt Accession

A0A072UM21; A0A072UM21_MEDTR

Genbank Protein ID

AML83900.1; AMM03158.1; KEH30143.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KU240012; KU285617; CM001220

Gene Name

PUB2; MTR_4g063800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g063800	KEH30143	KEH30143

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.70e-34	117.2	255	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM dPv++++G+ty+rs+Iekwl++g+ tcP+t+q+lt++ l+Pn++lr+li++wce+n++
   Q: 255  IPSDFKCPISLELMMDPVIVSTGQTYERSCIEKWLQDGHGTCPKTQQSLTSTVLTPNYVLRSLIEQWCEANGI 327
           89********************************************************************986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEGEKVNVVI DLVNEIANIS DFRPMVKKQY CNLARRLKLL IPLFEEIRDM KDSIPNDTSK 60
ALVLFKDALD SAKELLRFGC EGSKIYMVLE RDRIMNNFYE VTARLEQSLD GISYDKLDIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTAATCT CAACAAATGC ATCTCAATCA AAGTTCGTAC CCTTTTCAAT CACTTTATCT 60
TAAGCCGCGC CACAAAAAAA GCCACTAATT GAAAGAAAGA AAGAAAAAAA GATCATCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_4g063800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	63.27	0.00e+00	698.00
IUUC-Aly-005681	Arabidopsis lyrata	68.31	0.00e+00	858.00
IUUC-Ath-007618	Arabidopsis thaliana	67.58	0.00e+00	857.00
IUUC-Bdi-014772	Brachypodium distachyon	61.05	0.00e+00	744.00
IUUC-Bol-015254	Brassica oleracea	68.51	0.00e+00	844.00
IUUC-Bra-017857	Brassica rapa	67.88	0.00e+00	828.00
IUUC-Gma-043064	Glycine max	85.45	0.00e+00	1145.00
IUUC-Hvu-047052	Hordeum vulgare	63.73	0.00e+00	668.00
IUUC-Lpe-051284	Leersia perrieri	61.82	0.00e+00	741.00
IUUC-Mac-065438	Musa acuminata	58.57	0.00e+00	721.00
IUUC-Oba-075184	Oryza barthii	62.18	0.00e+00	751.00
IUUC-Obr-076590	Oryza brachyantha	61.05	0.00e+00	728.00
IUUC-Ogl-077386	Oryza glaberrima	62.18	0.00e+00	751.00
IUUC-Ogu-078326	Oryza glumaepatula	62.18	0.00e+00	751.00
IUUC-Oin-079687	Oryza indica	62.18	0.00e+00	748.00
IUUC-Olo-081001	Oryza longistaminata	62.18	0.00e+00	749.00
IUUC-Ome-081417	Oryza meridionalis	61.82	0.00e+00	756.00
IUUC-Oni-082379	Oryza nivara	62.18	0.00e+00	748.00
IUUC-Opu-083774	Oryza punctata	61.34	0.00e+00	750.00
IUUC-Oru-084885	Oryza rufipogon	62.18	0.00e+00	749.00
IUUC-Osa-085946	Oryza sativa	62.01	0.00e+00	747.00
IUUC-Ppa-095383	Physcomitrella patens	50.15	7.00e-169	586.00
IUUC-Pop-098809	Populus trichocarpa	74.85	0.00e+00	984.00
IUUC-Ppe-102057	Prunus persica	78.07	0.00e+00	844.00
IUUC-Smo-109443	Selaginella moellendorffii	51.44	3.00e-159	554.00
IUUC-Sit-110392	Setaria italica	66.97	0.00e+00	711.00
IUUC-Sly-111594	Solanum lycopersicum	72.60	0.00e+00	929.00
IUUC-Stu-112876	Solanum tuberosum	72.29	0.00e+00	906.00
IUUC-Sbi-113843	Sorghum bicolor	61.95	0.00e+00	712.00
IUUC-Tca-121745	Theobroma cacao	73.68	0.00e+00	935.00
IUUC-Tae-123188	Triticum aestivum	60.80	0.00e+00	731.00
IUUC-Tur-126448	Triticum urartu	64.61	0.00e+00	722.00
IUUC-Vvi-131752	Vitis vinifera	76.70	0.00e+00	927.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence