iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005818

Ensembl Protein ID

scaffold_501429.1

UniProt Accession

D7LMP6; D7LMP6_ARALL

Genbank Protein ID

EFH51995.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_905725

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_501429.1	scaffold_501429.1	scaffold_501429.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-23	80.7	53	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH++ v++++f s+ + lvsGsdD +i++W++ +g
   Q: 53   GHEGCVNAVEFnSTgDVLVSGSDDRQIMLWNWLSG 87
           8**********97779***************8766 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MARPRRRNTE IGDGFTEIFN REIGFSHPIT ISRRISASEG IVKKLDLYGK LNGHEGCVNA 60
VEFNSTGDVL VSGSDDRQIM LWNWLSGSRT LSYPSGHCEN VFQTKFIPFT DDRTIITSGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAAGACTT TGAACTTAAA CAATGGCGAG ACCGAGACGA AGAAACACAG AGATCGGTGA 60
TGGCTTCACA GAGATATTCA ACAGAGAGAT TGGTTTCTCT CATCCAATCA CCATCTCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_905725

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	48.91	1.00e-130	459.00
IUUC-Atr-002578	Amborella trichopoda	57.89	1.00e-162	565.00
IUUC-Apl-003181	Anas platyrhynchos	35.40	8.00e-38	151.00
IUUC-Ath-006585	Arabidopsis thaliana	90.68	0.00e+00	954.00
IUUC-Bol-016291	Brassica oleracea	88.70	0.00e+00	874.00
IUUC-Bra-017588	Brassica rapa	85.21	0.00e+00	847.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	32.54	4.00e-31	129.00
IUUC-Dor-030879	Dipodomys ordii	29.52	6.00e-26	112.00
IUUC-Fal-037527	Ficedula albicollis	33.75	2.00e-39	157.00
IUUC-Gma-044124	Glycine max	63.08	3.00e-176	610.00
IUUC-Hvu-047687	Hordeum vulgare	51.89	2.00e-137	481.00
IUUC-Lpe-051191	Leersia perrieri	51.76	6.00e-137	479.00
IUUC-Loc-052880	Lepisosteus oculatus	33.01	6.00e-38	152.00
IUUC-Mtr-057813	Medicago truncatula	61.06	1.00e-170	592.00
IUUC-Mga-059293	Meleagris gallopavo	36.98	1.00e-37	151.00
IUUC-Mac-064558	Musa acuminata	53.91	1.00e-152	532.00
IUUC-Oba-075746	Oryza barthii	54.98	1.00e-143	502.00
IUUC-Obr-076629	Oryza brachyantha	52.85	3.00e-145	508.00
IUUC-Ogl-077243	Oryza glaberrima	55.34	4.00e-147	514.00
IUUC-Ogu-078029	Oryza glumaepatula	55.43	3.00e-145	508.00
IUUC-Olo-080308	Oryza longistaminata	55.00	7.00e-134	469.00
IUUC-Ome-081126	Oryza meridionalis	57.11	5.00e-136	476.00
IUUC-Oni-083114	Oryza nivara	56.32	2.00e-146	511.00
IUUC-Opu-083288	Oryza punctata	53.12	2.00e-137	481.00
IUUC-Oru-084724	Oryza rufipogon	56.32	4.00e-146	510.00
IUUC-Osa-085895	Oryza sativa	55.34	4.00e-147	514.00
IUUC-Ola-086755	Oryzias latipes	33.44	9.00e-39	154.00
IUUC-Olu-087847	Ostreococcus lucimarinus	30.33	3.00e-38	151.00
IUUC-Ppa-095529	Physcomitrella patens	50.47	2.00e-119	421.00
IUUC-Pgr-103528	Puccinia graminis	21.48	6.00e-13	68.20
IUUC-Smo-108963	Selaginella moellendorffii	50.95	8.00e-122	429.00
IUUC-Sit-110823	Setaria italica	54.97	2.00e-151	528.00
IUUC-Sly-111605	Solanum lycopersicum	65.59	2.00e-170	591.00
IUUC-Stu-111978	Solanum tuberosum	61.51	4.00e-176	610.00
IUUC-Sbi-114455	Sorghum bicolor	55.67	1.00e-151	529.00
IUUC-Tae-125798	Triticum aestivum	51.05	1.00e-136	479.00
IUUC-Tur-126381	Triticum urartu	47.17	2.00e-118	418.00
IUUC-Vpa-130145	Vicugna pacos	34.26	2.00e-37	150.00
IUUC-Vvi-131034	Vitis vinifera	61.72	6.00e-179	619.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence