iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065417

Ensembl Protein ID

GSMUA_Achr3P25440_001

UniProt Accession

M0SHR0; M0SHR0_MUSAM

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr3G25440_001	GSMUA_Achr3T25440_001	GSMUA_Achr3P25440_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-14	54.4	188	229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+d v++l+f      d ++l sG++D t+++WD+ +g ll
   Q: 188  GHKDYVSGLSFacpsgYDhGFLFSGGGDSTVRLWDFFSGLLL 229
           8************98744688**************9888765 PP

Organism

Musa acuminata

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MDVKVAPALI SVHPFEKSVV VAVGSELRLF NLEGDCSVSL KDDSGGPLHS DAIRAITFGA 60
NGRLFVSAGD DKLVKIWATS SWHCVCSVSA DKRVSAVAIS HNGKYVAFAD KFGVIWLITL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTCA AAGTCGCTCC AGCACTGATC TCTGTTCATC CTTTTGAGAA ATCAGTTGTT 60
GTTGCAGTGG GTTCTGAACT CCGGCTCTTC AATTTAGAGT AAGCTTTGTA AATTTTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	53.25	8.00e-111	393.00
IUUC-Bgr-012067	Blumeria graminis	29.73	1.00e-11	63.90
IUUC-Bta-012788	Bos taurus	28.03	4.00e-21	95.10
IUUC-Gga-040547	Gallus gallus	27.80	2.00e-21	95.90
IUUC-Gma-043722	Glycine max	54.25	2.00e-111	395.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	27.14	3.00e-21	95.50
IUUC-Lch-050682	Latimeria chalumnae	30.85	3.00e-26	112.00
IUUC-Lpe-050712	Leersia perrieri	56.35	2.00e-127	448.00
IUUC-Mmr-061518	Microcebus murinus	31.43	2.00e-21	95.90
IUUC-Ont-071555	Oreochromis niloticus	29.29	7.00e-23	100.00
IUUC-Oba-075355	Oryza barthii	52.74	9.00e-121	426.00
IUUC-Obr-076769	Oryza brachyantha	56.56	3.00e-135	474.00
IUUC-Ogl-077168	Oryza glaberrima	57.31	3.00e-136	477.00
IUUC-Ogu-078275	Oryza glumaepatula	52.51	2.00e-119	422.00
IUUC-Oin-079207	Oryza indica	57.31	3.00e-136	477.00
IUUC-Ome-081169	Oryza meridionalis	50.24	4.00e-51	195.00
IUUC-Oni-082437	Oryza nivara	52.51	2.00e-119	422.00
IUUC-Opu-084031	Oryza punctata	57.31	5.00e-134	470.00
IUUC-Oru-084380	Oryza rufipogon	52.74	2.00e-120	425.00
IUUC-Osa-085327	Oryza sativa	57.31	8.00e-136	476.00
IUUC-Oar-090239	Ovis aries	27.65	1.00e-20	93.60
IUUC-Ppa-095757	Physcomitrella patens	37.50	3.00e-66	244.00
IUUC-Sja-107780	Schizosaccharomyces japonicus	28.51	5.00e-18	84.70
IUUC-Spo-108251	Schizosaccharomyces pombe	29.61	7.00e-16	77.80
IUUC-Sit-110020	Setaria italica	56.83	3.00e-130	457.00
IUUC-Sly-111543	Solanum lycopersicum	55.26	2.00e-128	451.00
IUUC-Stu-111925	Solanum tuberosum	54.78	2.00e-128	451.00
IUUC-Sbi-114061	Sorghum bicolor	56.56	2.00e-130	457.00
IUUC-Tbe-127683	Tupaia belangeri	42.27	7.00e-14	71.20
IUUC-Ttr-129056	Tursiops truncatus	32.41	3.00e-20	92.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence