iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075996

Ensembl Protein ID

OBART03G39790.1

UniProt Accession

A0A0D3FQZ1; A0A0D3FQZ1_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART03G39790	OBART03G39790.1	OBART03G39790.1
OBART03G39790	OBART03G39790.2	OBART03G39790.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-17	63.6	55	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH ++v+ +a+  +    +l+s+++Dg + vW 
   Q: 55   GHYGPVWRVAWahPKfgSILASCGYDGRVVVWK 87
           7999********95443689************7 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MSSNKIELDH KDMVHDSAID YYGKRLATAS SDSTVQISSI GGASAPSQLL ATLSGHYGPV 60
WRVAWAHPKF GSILASCGYD GRVVVWKEGA AGQWSQAHVF DNHKSSLNSI AWAPYELGLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCAA ACAAGATAGA GCTTGACCAC AAGGACATGG TCCATGATTC TGCCATCGAC 60
TACTACGGGA AGCGCCTTGC CACAGCCTCC TCGGACTCCA CCGTGCAGAT CAGCAGCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003604--Matrin/U1-like-C_Znf_C2H2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR022755--Znf_C2H2_jaz
IPR013087--Znf_C2H2_type

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40
PF12171--zf-C2H2_jaz

SMART

SM00320--WD40
SM00451--ZnF_U1

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000731	Aegilops tauschii	82.83	5.00e-146	509.00
IUUC-Bdi-014112	Brachypodium distachyon	81.47	9.00e-152	528.00
IUUC-Obr-076816	Oryza brachyantha	89.93	2.00e-159	553.00
IUUC-Ogl-077298	Oryza glaberrima	100.00	1.00e-176	611.00
IUUC-Ogu-078210	Oryza glumaepatula	96.64	1.00e-169	587.00
IUUC-Oin-079576	Oryza indica	99.33	1.00e-175	608.00
IUUC-Olo-080917	Oryza longistaminata	97.32	3.00e-161	560.00
IUUC-Oni-082464	Oryza nivara	99.66	3.00e-176	610.00
IUUC-Opu-084087	Oryza punctata	98.32	1.00e-173	601.00
IUUC-Oru-084308	Oryza rufipogon	99.40	0.00e+00	909.00
IUUC-Osa-085681	Oryza sativa	99.33	1.00e-175	608.00
IUUC-Tae-125615	Triticum aestivum	83.50	4.00e-147	513.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence