iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051489

Ensembl Protein ID

LPERR04G09000.1

UniProt Accession

A0A0D9W4U0; A0A0D9W4U0_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR04G09000	LPERR04G09000.1	LPERR04G09000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-32	112.6	8	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl..teedlvPnltlrrliqawceenss 74
           evp++f+CpIsle+MrdPv+l++Gitydr+sIe+w+ ++g+ +cPvt+q+l  ++++ +Pn+tlrrliq wc+ +++
   Q: 8    EVPSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHgECPVTKQRLapADREPTPNHTLRRLIQGWCAVHAV 84
           69**********************************555555*********7666777***************9976 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MSVAAAVEVP SYFVCPISLE IMRDPVTLST GITYDRESIE RWVFTDGHGE CPVTKQRLAP 60
ADREPTPNHT LRRLIQGWCA VHAVERIPTP RPPVDAARVA AIVDAARLKQ KQQLMDSLRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGTCG CGGCGGCGGT GGAGGTGCCG TCATATTTCG TGTGCCCGAT CTCGCTGGAA 60
ATCATGCGTG ATCCGGTGAC GCTATCGACG GGGATCACCT ACGACCGGGA GAGCATCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000554	Aegilops tauschii	69.68	1.00e-155	542.00
IUUC-Atr-002430	Amborella trichopoda	41.61	3.00e-84	304.00
IUUC-Bdi-014365	Brachypodium distachyon	63.54	1.00e-154	538.00
IUUC-Hvu-047293	Hordeum vulgare	60.73	3.00e-119	421.00
IUUC-Mtr-058052	Medicago truncatula	43.47	2.00e-100	358.00
IUUC-Mac-065005	Musa acuminata	42.79	3.00e-84	304.00
IUUC-Obr-076783	Oryza brachyantha	78.21	5.00e-99	353.00
IUUC-Ogl-077357	Oryza glaberrima	75.17	8.00e-164	569.00
IUUC-Ogu-078170	Oryza glumaepatula	70.25	4.00e-145	506.00
IUUC-Oin-079232	Oryza indica	72.77	2.00e-150	524.00
IUUC-Ome-081385	Oryza meridionalis	74.38	4.00e-161	560.00
IUUC-Oni-082736	Oryza nivara	71.79	3.00e-139	487.00
IUUC-Opu-083559	Oryza punctata	73.58	3.00e-149	520.00
IUUC-Oru-084866	Oryza rufipogon	72.77	6.00e-149	520.00
IUUC-Ppe-102059	Prunus persica	43.80	9.00e-100	356.00
IUUC-Sit-110187	Setaria italica	65.29	2.00e-126	445.00
IUUC-Sly-111579	Solanum lycopersicum	41.69	6.00e-90	323.00
IUUC-Stu-112238	Solanum tuberosum	42.86	7.00e-101	359.00
IUUC-Tae-125072	Triticum aestivum	69.21	4.00e-156	543.00
IUUC-Tur-126719	Triticum urartu	69.44	1.00e-155	542.00
IUUC-Vvi-131012	Vitis vinifera	45.11	5.00e-99	353.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence