iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080924

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538822.1_FG005	KN538822.1_FGT005	KN538822.1_FGP005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-07	31.0	47	92

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadCl...qkwpglknssskefrCPlCr 46
           C+ C++ ++ g  +++l+CgHvfh+dC     kw     +     +CP Cr
   Q: 47   CSMCQYGMEAGevVRTLSCGHVFHKDCYysvDKW-----LREHGLSCPECR 92
           99****995555599************7677999.....7888889****8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDKGGFIAVL VAFGLINLGL HLYERAPGWL VWMLGGVTTL DRALGDCSMC QYGMEAGEVV 60
RTLSCGHVFH KDCYYSVDKW LREHGLSCPE CRKKARSVRV LPWRARPQQP LPEEQNPPPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATAAGG GGGGATTCAT TGCAGTCCTC GTCGCCTTTG GGCTCATCAA CCTCGGCTTG 60
CACTTGTACG AGAGGGCGCC GGGGTGGTTG GTGTGGATGC TCGGCGGCGT CACCACGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051173	Leersia perrieri	50.00	1.00e-34	139.00
IUUC-Ogl-077053	Oryza glaberrima	96.46	1.00e-83	301.00
IUUC-Ogu-078541	Oryza glumaepatula	94.95	2.00e-82	296.00
IUUC-Oin-079957	Oryza indica	94.95	2.00e-82	296.00
IUUC-Ome-081287	Oryza meridionalis	95.90	2.00e-80	290.00
IUUC-Oni-082661	Oryza nivara	94.95	2.00e-82	296.00
IUUC-Oru-084869	Oryza rufipogon	94.95	2.00e-82	296.00
IUUC-Sit-110674	Setaria italica	51.14	2.00e-15	73.90
IUUC-Sbi-113908	Sorghum bicolor	51.95	4.00e-12	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence