iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005689

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_918469

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_801869.1	scaffold_801869.1	scaffold_801869.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-07	30.3	37	99
E3 activity/RING/RING	1.20e-08	36.0	40	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPn 58
            f C I le  +dPvv+ +G+ y   +I +wl+ +++          cPv+++ ++  +lvP 
   Q: 37   CFDCNICLETAHDPVVTLCGHLYCWPCIYRWLDVQKSssfsiiqqqNCPVCKSNISIGSLVPL 99
           599*****************************888888999*******************996 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C iCle   d p+v+ CgH+++  C+++w    + ++ s  ++++CP+C+
   Q: 40   CNICLETAHD-PVVTLCGHLYCWPCIYRWldvqKSSSFSIIQQQNCPVCK 88
           99********.9999****************9999999999999*****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEGNFFRFDA QRAHGDGFVL KQKPNHIAVP TEHESGCFDC NICLETAHDP VVTLCGHLYC 60
WPCIYRWLDV QKSSSFSIIQ QQNCPVCKSN ISIGSLVPLY GRGMSSSSSS SELTIIPQRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAGGATCT TACTACGTTC ATGGAAGGAA ATTTCTTTAG GTTTGATGCT CAACGAGCAC 60
ATGGTGATGG GTTTGTATTG AAACAAAAGC CGAATCATAT CGCGGTTCCA ACGGAACACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_918469

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence