iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114564

Ensembl Protein ID

Sb06g033000.1

UniProt Accession

C5YAJ5; C5YAJ5_SORBI

Genbank Protein ID

EES11653.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G267800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g033000	Sb06g033000.1	Sb06g033000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-29	99.9	475	510

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           Htd vtc++f   +d++++sGs D ++++W++r+ +
   Q: 475  HTDYVTCIQFnpvDDNFFISGSLDEKVRIWNVRDRK 510
           ************766*****************9865 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPEAARARGM LDPAGEGEAE QEEEFYESLD RILSSSCSST SASASDDDAD HRRRSSRRHH 60
LLHQHHHNPP PSSRPDASSA YDVWISEPTS VEERRRLLLQ RLGLASDPPP PSPPRRSPSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCGTATAA ATCCGCTCGC CGTTTGGGCG CGCCCACCGC TCCGGTCCGC TCGCCGCCGA 60
CCGACCCTCA CAGCCGCGGC CGGCCGCGCG AGTGGGTGGG TGCCGGTGCC GGTGCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_06g033000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000157	Aegilops tauschii	79.67	0.00e+00	862.00
IUUC-Atr-002683	Amborella trichopoda	52.41	9.00e-141	493.00
IUUC-Bdi-014734	Brachypodium distachyon	83.61	0.00e+00	939.00
IUUC-Cel-018681	Caenorhabditis elegans	37.82	2.00e-60	227.00
IUUC-Dme-032135	Drosophila melanogaster	34.29	8.00e-61	228.00
IUUC-Lpe-050902	Leersia perrieri	84.39	0.00e+00	992.00
IUUC-Mvi-060254	Microbotryum violaceum	39.76	3.00e-58	219.00
IUUC-Nfi-068449	Neosartorya fischeri	29.69	9.00e-39	154.00
IUUC-Oba-075039	Oryza barthii	85.17	0.00e+00	960.00
IUUC-Obr-076536	Oryza brachyantha	85.62	0.00e+00	926.00
IUUC-Ogl-077572	Oryza glaberrima	85.02	0.00e+00	964.00
IUUC-Ogu-078866	Oryza glumaepatula	84.85	0.00e+00	962.00
IUUC-Oin-079225	Oryza indica	85.02	0.00e+00	966.00
IUUC-Olo-080846	Oryza longistaminata	80.79	0.00e+00	886.00
IUUC-Ome-081525	Oryza meridionalis	85.17	0.00e+00	967.00
IUUC-Oni-082288	Oryza nivara	85.33	0.00e+00	967.00
IUUC-Opu-083458	Oryza punctata	85.17	0.00e+00	966.00
IUUC-Oru-085014	Oryza rufipogon	85.17	0.00e+00	966.00
IUUC-Osa-086029	Oryza sativa	85.17	0.00e+00	966.00
IUUC-Sit-110492	Setaria italica	84.81	0.00e+00	1104.00
IUUC-Sar-112958	Sorex araneus	57.14	3.00e-18	86.30
IUUC-Sre-114996	Sporisorium reilianum	33.62	2.00e-43	169.00
IUUC-Tvi-122654	Trichoderma virens	33.49	2.00e-55	209.00
IUUC-Tae-125516	Triticum aestivum	80.48	0.00e+00	937.00
IUUC-Tur-126266	Triticum urartu	83.77	0.00e+00	874.00
IUUC-Uma-129369	Ustilago maydis	31.01	1.00e-38	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence